| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5309 |
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| Symbol | |
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| ID | 8329511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6310806 |
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| End bp | 6312149 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644945748 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003102976 |
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| Protein GI | 256379316 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.574903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCAC TCCGATACGG CGGACTCGCC GCAGCCGTGC TCATGGCCAC CGCTGCCTGT
GCAGGCGCGG GCGGCGGCGG TGGCGGGAAC GAGAACTCGA TCAACGTTCT CATGGTCAAC
AACCCGCAGA TGGAAGACCT CCAGAAGCTC ACCGCGGACA ACTTCACCAA GGACACGGGC
ATCACGGTGA ACTTCACCGT CCTGCCCGAG AACGACGTCC GCGACAAGAT CAGCCAGGAC
TTCTCCAGCC AGGCCGGGCA GTACGACGTC GCCACGATCT CCAACTACGA GACGCCGATC
TACGCCAAGA ACAACTGGCT GACCCCGCTC GACGAGTACG TCGCCAAGGA CTCCGGCTTC
GCCCAGGACG ACGTCCTGGA GTCGGTGCGC CAGTCCCTGA CCGCCGCCGA CGGCAAGGTC
TACGCCCAGC CGTTCTACGG CGAGTCCTCG TTCCTGATGT ACCGCAAGGA CATCATGGAC
GCCAAGGGCA TCACCATGCC GGAGAAGCCC ACCTGGCAGC AGGTCGCCGA CATCGCCGCC
CAGGTCGACG GCGCCGAGCC CGGCATGAAG GGCATCTGCC TGCGCGGCCA GCCCGGCTGG
GGCCAGCTGA TGGCGCCGCT CACCACGGTC GTCAACACCT TCGGCGGCAC CTGGTTCACG
AAGGACTGGC AGGCCCAGGT GAACTCCCCG GAGTTCAAGG AGGCCACCGA CTTCTACGTC
AACCTGGTCC GCGACCACGG TGAGAACGGC GCCCCGCAGG CCGGCTTCGC CGAGTGCCTG
AACAACATGA CCCAGGGCAA GGTCGCCATG TGGTACGACG CGACCTCCGC CGCCGGCCTC
CTCGAGGGCG CCGACTCGCC GGTGAAGGGC AAGCTCGGCT TCGCCCAGGC CCCCGTGGTC
AAGACCGACA GCTCGGGCTG GCTCTACACC TGGGCGTTCG GCATCCAGAA GGCCAGCAAG
AAGGCCGACA ACGCCTGGAA GTTCATCTCC TGGGCCTCCG GCAAGGGCTA CGAGGAGCTG
GCGGGCAAGT CCCTCGGCTG GTCGCGCGTC CCGGACGGCA AGCGCTCCTC CACCTACGCG
CGCCCCGAGT ACCTCGAGGC CAGCGGCACG TTCGCCAAGC AGGTCGAGGC CGCCATCTCC
GGCACCAAGC CGACCGACCC CGGCGTGCAG CCCCGCCCGG CCCCCGGCAT CCAGTTCGTC
GGCATCCCGG AGTTCACCGA CCTGGGCACC CAGGTCTCCC AGAAGATCAG CGCCGCGATC
GCCGGCTCCA CCACCGTCGA GCAGGCCCTG ACCGAGAGCC AGGCCCTGGC CGAGACCGTG
GCCGAGAAGA ACCGGGGCAA GTGA
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| Protein sequence | MKSLRYGGLA AAVLMATAAC AGAGGGGGGN ENSINVLMVN NPQMEDLQKL TADNFTKDTG
ITVNFTVLPE NDVRDKISQD FSSQAGQYDV ATISNYETPI YAKNNWLTPL DEYVAKDSGF
AQDDVLESVR QSLTAADGKV YAQPFYGESS FLMYRKDIMD AKGITMPEKP TWQQVADIAA
QVDGAEPGMK GICLRGQPGW GQLMAPLTTV VNTFGGTWFT KDWQAQVNSP EFKEATDFYV
NLVRDHGENG APQAGFAECL NNMTQGKVAM WYDATSAAGL LEGADSPVKG KLGFAQAPVV
KTDSSGWLYT WAFGIQKASK KADNAWKFIS WASGKGYEEL AGKSLGWSRV PDGKRSSTYA
RPEYLEASGT FAKQVEAAIS GTKPTDPGVQ PRPAPGIQFV GIPEFTDLGT QVSQKISAAI
AGSTTVEQAL TESQALAETV AEKNRGK
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