| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5304 |
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| Symbol | |
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| ID | 8329506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6303143 |
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| End bp | 6306604 |
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| Gene Length | 3462 bp |
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| Protein Length | 1153 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945743 |
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| Product | AAA ATPase |
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| Protein accession | YP_003102971 |
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| Protein GI | 256379311 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2251] Predicted nuclease (RecB family) |
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| TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGCG CCAACGGCAG GTACGTCCAC TCACCGGGTG ACTTGGTCGA CCTGCTGGAG
TGCGAGCACC GCTCCCGGCT GACCACCGCG CTGACCAAGG GCGTGCCCGA CGCCCCGCAG
CCCGCTCCCC CGCAGGACCT GCTCGCGGCG CGGCACGGGC TCGCGCACGA GAAGGCCGTG
CTGGAGCGGT TCCTGGCCGC GGGCGAGGTC TTCGAGGTGC CGCAGCCGGC CCCGGTGCAC
GAGGCGCTGG TGGAGGCCGC CGCGCTGACC TGGGACGCGA TCGCGCGCCG GGTCCCGGTG
ATCTACCAGG GGGTCTTCTA CGACGGGGAC TTCCACGGGC GGGCCGACTT CCTCGTGCTG
ACCGAGGACG GGTACGAGCC GCACGACGCG AAGCTCGCCC GGCACCCCAC GCCCGCGGCG
GTCGTGCAGC TGACCGCGTA CTCGGCGGCG CTCGGCGACC AGGCGGGCCC GAAGGCGCAC
CTGCTGCTCG GGGACAACAC CACCAGGACG TTCCGGGTCT CCGACTTCCT GCCGATCGTC
GCCGACCTGC GGGCCCGGCT GCGCGCCACC GTCGCCGCGC CGCCCGCGCT CCCGGCGCGG
CTGTGGGACG ACGAGCGGCC CGCGTGCGCC ACCTGCCGGT TCTCCGCGCA CTGCGCCGAC
GGGCGCGAGC GCTCCCGCGA CCTGTCGCTG GTGGCGGGCA TCCGGACCGA CCAGCGGCGC
AAGCTCGCCT CCGCCGGGCT GGACACCATC GACGCGCTCG CGAACGCCAC CAACACCGAG
CGCCCGACGA CCATGTCGCA GGGGACGTTC GCCGGGTTGC GCGCGCAGGC CGCGCTGCAG
GTCATCCAGG ACACCTCGCG CACCCGCGAC AACCCCGTCG GCAAGGTCGC CTACGAGGTC
GTGGTGCCGG ACGCGCTCGC CTCGCTCCCC CAGCCCAGCC CCGGCGATCT GTTCTTCGAC
ATGGAGGGCG ACCCGTACGC GCTCGCGGGC GAGGGCCTGG AGTACCTGTT CGGCATGGTC
ACCCACGAGG AGGTGTTCAC CCCGTTCTGG GCGCACACCC GGCCGCAGGA GAAGGCCGCG
TTCGAGCGCC TGGTCGACCT GGCGACCTCG CGGCTGGCCG AGCACCCCGA CGCGCACGTC
TACCACTACG CGCCCTACGA GGTGAGCGCG CTCAAGCGGC TCGCGGCGCT GCACGGCACG
CGCGAGGAGG AGGTCGACCA CCTGCTGCGG TCGAACGCGC TGGTGGACCT GTACGCGGTG
GTGCGCAAGG CGCTGCGGGT GTCGCAGCGG TCGTACTCGA TCAAGTACCT GGAACCGCTC
TACATGCCCG AGGCCCGCTC GGGGGACGTC AAGAACGCGG TGTCCAGCAT CGAGGCGTAC
GAGGAGTACC TGGTGCTGAC GTCGATGGGC GACACCGGGC GCGCGGAGGA GGTGCTGGAC
GGGATCGCCG AGTACAACAC CTACGACTGC GTGTCCACGC TGCGGCTGTA CCGGTTCCTC
CTCCAGGTGC GGGAGGAGGC CGGGATCGAG CCGCGCACGG CCGAGCAGTC GCTGTACGAG
GAGATCGAGG ACGAGATCGC CCAGCAGCGG CGGGCCGAGC GGGCGGAGCG GATCGCCGCC
GTGGTGGACC CGCTGATCGA GGGCCTGCCG GACAACCCGG CCGACTTCAC CGACGACGAG
CGGGCGCGGG CGCTGCTGGC GGCGGCGGTC GGGTACCACC GGCGGGAGAC GAACCCGGCG
TGGTGGGACT TCTTCCGGCA GCTCGCGGCC CCGCTGTCGG AGCTGGAGTC GGACAGCTCG
TGCGCGGTCG CGGTGTCGGT GCGGGCGGAC GACTGGGTGC AGCCCGCGGG CCGGGTGAAG
AAGGCCAAGC GGGAGGTGCG GGTGCGCTGC GACCCGGACC GGCCGCACCC GTTCAGCAAG
GGCGAGAAGG TGCGGCTGCT CTACCCCGGC ACGCCGGACA GCGAGACCCG CGACGCCGAG
GTGCTGTTCG AGTCCGCCGA CGAGGTGGTG CTGCTGGAGA GCGCCTCCCC CGACGAGGCG
GGCGGCGGGA ACCCGGTGGC GGTGCTGCCG GGGTCGCCGG TGCGGCCCGC GCCCAAGGAC
GAGGCGGTGT ACGAGCTGGC GCGGCTGGTG GTCGAGCACC TGCCCGAGCT GCCCGCGCAT
CCGGGGGTGG ACCTGGCGCG GCGGCTCGCG CCCCGGTTGC GGGCGGGCTC GCTGCCGCGG
TCGGGGGACG TGATCGCGGA CGTGATCGGG GCGGTGGACG CGCTGGCCGG GTCGGTGCTG
GCCGTGCAGG GGCCGCCGGG GGCGGGCAAG ACGTACCTGG CGGGGCGGTT GATCGCGCAC
CTGATCGCGG GCGGGCGCAG CGTCGGGGTG ACGTCCAACA GCCACAAGGC CGTGGAGAAC
GTGCTGACCG CCGCCATCAA GGCCGGGCGG GAGCTGGGGG TGCCGATCCC GGCCGCGAAG
AACCCCAAGG GGCAGCCGGT GAAGGACTGC CTGTGGGAGC AGACGAAGAA CAACCCGGCG
CTGCTGCGCT GGCGCGAGGA CCAGGGCGGC GGGCACCTGG TCGGCGGCAC GGCGTGGACG
TTCTCCAACG CGGCCATGCG GGAGCAGCCG TTCGACGTGC TGATCGTGGA CGAGGCCGGG
CAGTTCGCGC TCGCCGACGC GCTCGCGGTG TCCACGGCCG CCAGGAACCT GGTGCTGCTG
GGCGATCCGC AGCAGCTGCC GCAGGTCGTG CAGGGCACGC ACCCGGCGGG CGCGGACGCG
TCGGCGCTCG GGCACGTCAT CGGCGACGCG GACGTGATGC CGCCGGAGCT GGGCTACTTC
CTGGCGCAGA CGCGGCGGAT GCACCCGTCG GTGTGCCTGC CGGTGTCGAA CCTGTCGTAC
GCGGGGCTGC TGCACGCGCA CGAGAGCGCG GGCGGGCGGC GGGTGGTCGG GATCGCGCCA
GGGCTGTACG TGCGGGAGGT CGACCACCGG CACAACACGA CCAAGTCGGA CGAGGAGGCG
GCGGCGGTCG GCGAGCTGGT CGCGGCGATC GTCGGGCGCG AGTGGGTGGA CGGGGATGAC
AGGCGGCCCC TGGAGTGCTC GGACGTGCTC GTGGTCGCCC CCTACAACCT GCAGGTGCGG
CTGGTGAAGC GGGAGCTGGA GCGGCGCGGG TTCGGCGAGG TGCGGGTCGG GACGGTGGAC
CGGTTCCAGG GGCAGGAGGC GCCGGTGGTG ATCAGCACCA TGACGTCGTC GTCGGCGGTG
GACCTGCCGC GCGGGCTGGA CTTCCTGCTC TCGCGCAACC GGGTCAACGT GGCGCTGTCT
CGGGCCCAGG CGCTCGCGGT GGTGGTGTGC TCGCCCCGGC TGGTGGAGGC GGACATCCGG
GGCGTCGAAC AGCTGCGGCT CGTTTCCGGG ATGATCGGGC TGCTCGGCGA GGCGCGGAAT
TGGAACAATT CTCCGGTTGC CGGGGGCGCG GCGGCGGGGT GA
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| Protein sequence | MFSANGRYVH SPGDLVDLLE CEHRSRLTTA LTKGVPDAPQ PAPPQDLLAA RHGLAHEKAV
LERFLAAGEV FEVPQPAPVH EALVEAAALT WDAIARRVPV IYQGVFYDGD FHGRADFLVL
TEDGYEPHDA KLARHPTPAA VVQLTAYSAA LGDQAGPKAH LLLGDNTTRT FRVSDFLPIV
ADLRARLRAT VAAPPALPAR LWDDERPACA TCRFSAHCAD GRERSRDLSL VAGIRTDQRR
KLASAGLDTI DALANATNTE RPTTMSQGTF AGLRAQAALQ VIQDTSRTRD NPVGKVAYEV
VVPDALASLP QPSPGDLFFD MEGDPYALAG EGLEYLFGMV THEEVFTPFW AHTRPQEKAA
FERLVDLATS RLAEHPDAHV YHYAPYEVSA LKRLAALHGT REEEVDHLLR SNALVDLYAV
VRKALRVSQR SYSIKYLEPL YMPEARSGDV KNAVSSIEAY EEYLVLTSMG DTGRAEEVLD
GIAEYNTYDC VSTLRLYRFL LQVREEAGIE PRTAEQSLYE EIEDEIAQQR RAERAERIAA
VVDPLIEGLP DNPADFTDDE RARALLAAAV GYHRRETNPA WWDFFRQLAA PLSELESDSS
CAVAVSVRAD DWVQPAGRVK KAKREVRVRC DPDRPHPFSK GEKVRLLYPG TPDSETRDAE
VLFESADEVV LLESASPDEA GGGNPVAVLP GSPVRPAPKD EAVYELARLV VEHLPELPAH
PGVDLARRLA PRLRAGSLPR SGDVIADVIG AVDALAGSVL AVQGPPGAGK TYLAGRLIAH
LIAGGRSVGV TSNSHKAVEN VLTAAIKAGR ELGVPIPAAK NPKGQPVKDC LWEQTKNNPA
LLRWREDQGG GHLVGGTAWT FSNAAMREQP FDVLIVDEAG QFALADALAV STAARNLVLL
GDPQQLPQVV QGTHPAGADA SALGHVIGDA DVMPPELGYF LAQTRRMHPS VCLPVSNLSY
AGLLHAHESA GGRRVVGIAP GLYVREVDHR HNTTKSDEEA AAVGELVAAI VGREWVDGDD
RRPLECSDVL VVAPYNLQVR LVKRELERRG FGEVRVGTVD RFQGQEAPVV ISTMTSSSAV
DLPRGLDFLL SRNRVNVALS RAQALAVVVC SPRLVEADIR GVEQLRLVSG MIGLLGEARN
WNNSPVAGGA AAG
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