| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5281 |
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| Symbol | |
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| ID | 8329483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6281528 |
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| End bp | 6282703 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644945720 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003102948 |
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| Protein GI | 256379288 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.119621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGCGC TGGGGACGGC GGGCGCGGTG CTGCTCGCCG GGGTCGCGGT GGTGGTGACG
CTGTGGTGGA CGTCCAAGCG GCGCAACGAC TTCGTGACGC AGGAGCAGCG GATCACGTTC
GAGACGCTGC ACACGGCGTG GTCGGCGGCC CCGCCGCTGC GGGCCGGGCT GGTGCCGGAC
GCGGCGCGGA AGTCGGCGCG GCACCTGAGG ACGCTGCTGG GGACGCCTGC GCTGGCGCTG
ACCGACGAGG AGCAGGTGGT CGCCTGGGAG GGCGCCGGGG AGCACCACTC GGCGGAGGCG
CTGGGGTTGG CGCGGGAGGT GTTCGCGACC GGGCGGACGC GGGCGTTCGA CGTGTCGTGC
GTGGAGGCGG ACTGCCCCGT GCACACGGCG GTGCTGGCGC CGTTGACGGT GGAGGGGCGG
GTGGTCGGGG TGCTGGCGGC GTACAGCCGG GAGGCGTCGG CGGGGTTGGT GCGGGCGACC
AACGAGGTGG CGCGGTGGGC GTCGGGGCAG CTGGAGCTGG CGGAGCTGGA CCGGTCGCGG
ACCCGGTTGG TGGAGGCGGA GGTGCGGGCG CTCCGGGCGC AGATCTCGCC GCATTTCATC
TACAACTCGC TGTCGGCGAT CGCGTCGTAC GTGCGGACGA ACCCGGAGCG GGCGCGGACG
TTGTTGTTGG ACTTCGCGGA CTTCACGCGG TACTCGTTCC GGCGGGCGGG GGACTTCACG
ACGCTGTCGG AGGAGCTGAG GTCGATCGAC CAGTACCTGG CGCTGGAGCG GGCGCGGTTC
GGCGAGCGGT TGCAGGTGAC GCTGCAGATC GCCCCGGAGG TCCTGCCGGT GACGGTGCCG
TTCCTGTGCT TGCAGCCGCT GGTGGAGAAC GCGGTGCGGC ACGGGATGGA GGGGAAGGTC
GGGCCGGGGC TGATCTCGAT CACGGCGGAG GACGCGGGGG ACGAGGCTCG GATCACCGTG
GAGGACGACG GGATCGGGAT GGACCCGGAC GCGCTGCGGC GGACTCTGGC GGGGAAGGTG
GGGGCCACGG CGGGGATCGG GTTGGGGAAC ATCGACGAGC GGTTGCGGCG GTGTTATGGG
GACGACTACG GGTTGGTCGT GGAGACCGCG CAGGGGTTGG GGACGAAGGT GAGCGTGCGG
GTGCCGAAGT ACCGGGCTGG GGTGCACGCG GACTAG
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| Protein sequence | MTALGTAGAV LLAGVAVVVT LWWTSKRRND FVTQEQRITF ETLHTAWSAA PPLRAGLVPD
AARKSARHLR TLLGTPALAL TDEEQVVAWE GAGEHHSAEA LGLAREVFAT GRTRAFDVSC
VEADCPVHTA VLAPLTVEGR VVGVLAAYSR EASAGLVRAT NEVARWASGQ LELAELDRSR
TRLVEAEVRA LRAQISPHFI YNSLSAIASY VRTNPERART LLLDFADFTR YSFRRAGDFT
TLSEELRSID QYLALERARF GERLQVTLQI APEVLPVTVP FLCLQPLVEN AVRHGMEGKV
GPGLISITAE DAGDEARITV EDDGIGMDPD ALRRTLAGKV GATAGIGLGN IDERLRRCYG
DDYGLVVETA QGLGTKVSVR VPKYRAGVHA D
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