Gene Amir_5279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5279 
Symbol 
ID8329481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6279379 
End bp6279813 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content77% 
IMG OID644945718 
Productprotein of unknown function DUF485 
Protein accessionYP_003102946 
Protein GI256379286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.237631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCGGA GGTCCGGGGA GCCGGGCTCG GGCGGTCCGG GTGGCCGCGA GCACGGTCCC 
GCGCCCGCGC CCACCCAGCG CGTCGTGGTG ACCAGCCCCC GCACCCGCGC CCCGCGCGCG
CCCCGCCCCT ACCCCGCGTC CCGCGAGATC GACGAGCAGA GCGAGCTCGG CGCGGTCTAC
ATGCGGTCGC TGATCCGCTC GCAGCGCAGG CTCGGCTTCA CGCTGTGCGC GGTGGTGTGC
GGGGCGGTCT CCGCGCTGCC GCTGCTGTTC GCGCTCGTCC CCGGCGTCGC CGAGCAGCGG
CTGCTCGGGT TGCAGCTGCC GTGGCTGCTG CTGGGCGTGC TGGTGTTCCC GGTGCTGGTG
GGGGCGGGCT GGTTCTACGT GCGGCAGGCC GAGCGCGGCG AGGCCGAGTT CGCCGAGCTG
GTGGAGCGTT CGTGA
 
Protein sequence
MSRRSGEPGS GGPGGREHGP APAPTQRVVV TSPRTRAPRA PRPYPASREI DEQSELGAVY 
MRSLIRSQRR LGFTLCAVVC GAVSALPLLF ALVPGVAEQR LLGLQLPWLL LGVLVFPVLV
GAGWFYVRQA ERGEAEFAEL VERS