| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5274 |
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| Symbol | |
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| ID | 8329476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6271178 |
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| End bp | 6273661 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644945713 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003102941 |
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| Protein GI | 256379281 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTCA CCGAACGGCT CCCCGCCGAA CCCGACGCAG ACACCCTCTT CGACGCCTTC
TCCGACTGGG CGTGGGACCA GGGCCTCCAG CTGTACCCGG CGCAGCAGGA GGCCCTGATC
GAGATCGTGT CGGGGGCGAA CGTCATCCTG AGCACGCCGA CCGGCTCCGG GAAGAGCATG
GTCGCGCTCG GCGCGCACTT CGCGGCCGTG GCCCAGGGCA GGCGCACCTT CTACACCGCC
CCGATCAAGG CGCTGGTGTC GGAGAAGTTC TTCGCGCTGA TCGAGGTGTT CGGCGCGGAC
AAGGTCGGCA TGATGACCGG CGACGCGTCG GTCAACGAGA CCGCGCCGAT CATCTGCTGC
ACCGCGGAGA TCCTGGCCAA CATGGCCCTG CGCGACGGCG CGGACGCGGA CGTGGGCATC
GTCGTGATGG ACGAGTTCCA CTTCTACTCC GAGCCCGACC GCGGCTGGGC GTGGCAGGTT
CCCCTGATCG AGCTGCCGAA GGCGCAGTTC GTGCTGATGT CGGCGACGCT CGGTGACGTC
ACCTTCTTCG AGAAGGACCT GACCAGGCGA ACCGGCCGGA CCACGGCCGT GGTGCGCTCG
GCTGAGCGCC CGGTGCCGCT GAACTTCCAG TACGTGACGA CGCCGCTGCA CGAGACGATC
GAGGAGCTGC TGCACGGCAA CGAGGCCCCC GTGTACGTCG TGCACTTCAC GCAGGCGTCG
GCGCTGGAGC GGGCGCAGTC GCTGATGAGC GTGAACGTGG CCACGCGCGC GGAGAAGGAC
GCCATCGCCA CCACGATCGG GCGATTCCGG TTCACGTCCG GGTTCGGCAA GACGCTGTCG
CGGTTGGTCA GGCACGGCAT CGGCGTGCAC CACGCGGGGA TGCTGCCCAA GTACCGGCGG
CTGGTCGAGC AGTTGGCGCA GGCCGGGCTG CTCAAGGTCA TCTGCGGCAC GGACACGCTC
GGCGTCGGCA TCAACGTGCC GATCCGCACG GTGCTGTTCA CGGCGCTGTC GAAGTACGAC
GGGACGCGCA CCCGGCACCT GAAGGCGCGC GAGTTCCACC AGATCGCGGG ACGGGCCGGG
CGCGCCGGGT ACGACACGAT GGGCACCGTC GTGGTGCAGG CGCCGGACCA CGTGGTGGAG
AACGAGAAGG CGCTGGCCAA GGCCGGTGAC GACCCGAAGA AGCGGCGCAA GGTCGTGCGC
AAGAAGGCGC CCGAGGGCTT CGTGTCGTGG AGCGACCAGA CGTTCGAGCG CCTGCGCGAC
GCCGAGCCGG AGCCGCTCAC GTCCAGCTTC CAGGTCAGCC ACGCGATGCT GCTCAACGTC
ATCGGCAGGC CCGGTGACGC GTTCGCGGCG ATGCGGCACC TGCTGGAGGA CAACCACGAG
TCGCGGCCCG CGCAGCGCAA GCACATCCTG CGGGCGATCT CGATGTACCG GGGCCTGCGG
ACGGCGGGCG TGGTCCAGCA GGACGCCGAC GGCATCCGGC TGACCGTGGA CCTGCAGGTC
AACTTCGCGC TGAACCAGCC GCTGTCCCCG TTCGCGCTGG CCGCGATCGA GCTGCTGGAC
CCGGCCGCGC CCGGCTACGC GCTGGACGTG CTGTCGGTGA TCGAGTCGAT CCTGGACGAC
CCGAGGCAGA TCCTCGGCGC GCAGGAGCAC AAGGCGCGCG GCGAGGCCAT CGGCGCGATG
AAGTCCGAGG GCATCGAGTA CGACCAGCGC ATGGAGCTGC TGGAGGAGGT GACCTGGCCG
AAGCCGCTGC AGGAGCTGCT GGAGGCCGCG TTCACCACCT ACCGGCGCGG GCACCCGTGG
GTCGCGGACC ACCACCTGTC GCCGAAGGCG GTGGTGCGGG ACATGTTCGA GCGGGCGATG
ACGTTCGCCG AGTACGTGTC GTACTACCAG CTGGCGCGGT CCGAGGGGCT GGTGCTGCGG
TACCTGGCGG ACGCGTACAA GACGCTGCGG CAGACCGTGC CGGAGGACGC GAAGACCGAG
GAGCTGAACG ACCTGGTGGA GTGGCTGGGC GAACTGGTGC GCCAGGTCGA CTCCAGCCTG
CTCGACGAGT GGGAGAAGCT GCGCAACCCC GGCGAGGAGC AGCTCCACGA CGACGCCCCG
CCCGCCGTGA CCCGCAACCT GCGGGCGTTC CGGGTGCTGG TGCGCAACGC GCTGTTCCGG
CGGGTGGAGC TGGCGGCGAG GCGGAACTAC TACGAGCTGG GCCAGCTCGA CGGCGACGCC
GGGTGGGGCG CGGACGAGTG GCGCGAGGCG CTGGAGCCGT ACTACGAGGA GCACTCGGAC
ATCGGCACGG GCCCGGACGC GCGCGGCCCG CAACTGCTCC TGATCACCGA GGGCGAGGAC
CGCTGGGAGG TCAGGCAGGT CTTCGAGGAC CCGGCGGGCG ACCGGGACTG GGGGTTCACG
GCGGAGGTCG ACCTGGAGGA GTCGGACGAG GCCGGGAACG CGGTGGTGCG GGTCGTCGAG
GTGGGGCGGT TGGAGGCGGT CTAG
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| Protein sequence | MTLTERLPAE PDADTLFDAF SDWAWDQGLQ LYPAQQEALI EIVSGANVIL STPTGSGKSM
VALGAHFAAV AQGRRTFYTA PIKALVSEKF FALIEVFGAD KVGMMTGDAS VNETAPIICC
TAEILANMAL RDGADADVGI VVMDEFHFYS EPDRGWAWQV PLIELPKAQF VLMSATLGDV
TFFEKDLTRR TGRTTAVVRS AERPVPLNFQ YVTTPLHETI EELLHGNEAP VYVVHFTQAS
ALERAQSLMS VNVATRAEKD AIATTIGRFR FTSGFGKTLS RLVRHGIGVH HAGMLPKYRR
LVEQLAQAGL LKVICGTDTL GVGINVPIRT VLFTALSKYD GTRTRHLKAR EFHQIAGRAG
RAGYDTMGTV VVQAPDHVVE NEKALAKAGD DPKKRRKVVR KKAPEGFVSW SDQTFERLRD
AEPEPLTSSF QVSHAMLLNV IGRPGDAFAA MRHLLEDNHE SRPAQRKHIL RAISMYRGLR
TAGVVQQDAD GIRLTVDLQV NFALNQPLSP FALAAIELLD PAAPGYALDV LSVIESILDD
PRQILGAQEH KARGEAIGAM KSEGIEYDQR MELLEEVTWP KPLQELLEAA FTTYRRGHPW
VADHHLSPKA VVRDMFERAM TFAEYVSYYQ LARSEGLVLR YLADAYKTLR QTVPEDAKTE
ELNDLVEWLG ELVRQVDSSL LDEWEKLRNP GEEQLHDDAP PAVTRNLRAF RVLVRNALFR
RVELAARRNY YELGQLDGDA GWGADEWREA LEPYYEEHSD IGTGPDARGP QLLLITEGED
RWEVRQVFED PAGDRDWGFT AEVDLEESDE AGNAVVRVVE VGRLEAV
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