| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5265 |
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| Symbol | alaS |
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| ID | 8329467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6261590 |
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| End bp | 6264262 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644945704 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003102932 |
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| Protein GI | 256379272 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGACAC ACGAGATCAT CAAGCGCTTC CGCGAGCACT TCGAGAACGC CGGGCACGCC
GTCGTCCCCA GCGCCTCGCT GCTGCTGGAC GACCCGAACC TGCTGTTCGT CAACGCGGGC
ATGGTGCCCT TCAAGCCCTA CTTCCTCGGT GAGGCCCCGT CGCCGCACAA GCGCGCCACC
AGCGTGCAGA AGTGCGTGCG CACGCCGGAC ATCGACGAGG TCGGCAAGAC CACCCGCCAC
CTGACGTTCT TCCAGATGGC GGGCAACTTC TCGTTCGGCG ACTACTTCAA GGAAGACGCC
ATCCGGCTCG CCTGGGACCT GGTCACCAAG TCCCAGGACG ACGGCGGCTA CGGCTTCGAC
CCCGAGCGCC TGTGGGTCAC CGTCTACCTG GACGACGACG AGGCCGCCGA CCTGTGGCAG
AAGATCGCCG GCCTGCCGCC GGAGCGCATC CAGCGCCGGG ACGTCGAGGA CAACTACTGG
TCCATGGGCG TCCCCGGCCC GTGCGGCCCG TGCTCGGAGA TCTACTACGA CCGCGGCCCC
GAGTTCGGCG CCGAGGGCGG CCCGGTCGTG GACGAGGACC GGTACCTGGA GATCTGGAAC
CTGGTCTTCA TGCAGAACGA GCGCGGGGCG GGCGGCGCCA AGCGCGACTA CCCGATCCTG
GGCGAGCTGC CGTCCAAGAA CATCGACACC GGCATGGGCG TCGAGCGGGT GGCGTTCCTG
CTGCAGGGCG TGGACAACGT CTACGAGACC GACCTGGTGC GGGCCGTCAT CACCAAGGCC
GAGGAGCTGT CCGGCCGCAA GTACGGCGAC AACCCGACCG ACGACGTCCG CTTCCGCGTC
ATCGCCGACC ACGCCCGCTC CGGCGTGCTG CTCGTCGGCG ACGGCGTCAC CCCCGGCAAC
GAGGCCCGCG GCTACGTGCT GCGCCGCCTG CTGCGCCGCA TCGTGCGCTC CTCGCGCCTG
CTGGGCGTGA CCGAGCCGGT GCTCCAGACG TTCGCCGCCG TCGTGCGCGA CACCATGGGC
CCCTCCTACC CGGAGCTGGT CAGCGGGTTC GCCCGCATCG AGCAGGTCCT CAAGGCCGAG
GAGGACACGT TCCTGCGCAC GCTGGACGCG GGCTCCCGGA TCTTCGAGAC CGCCGCCGGG
ACCGTGAAGT CGCAGGGCCG CGCGATCCTG CCCGGCGACA AGGCCTTCCA GCTGCACGAC
ACCTACGGCT TCCCGATCGA CCTCACCCTG GAGATGGCCT CCGAGGCGGG CCTGACCGTG
GACGAGGACG GCTTCCGCAA GCTCATGGCC GAGCAGCGCG CCCGCGCCAA GGCCGACGCG
GCGGGCAAGA AGACCGGCCA CGGCGACCAG ACGGTGTACC GGGAGCTGCT GGAGCTGGGC
GCCACCGAGT TCACCGGCTA CACCGAGCTG GCCAGCGAGG CCGTGCTGCG CGGCATCGTG
TCCGGCGGCA AGCGGGTGAA GTCGGCCCGC GAGGGCGACA TCGTCGAGGT CGTGCTCGAC
CGCACCCCCC TGTACGCCGA GTCCGGCGGC CAGGAGAGCG ACGCGGGCGT GATCGTCTCC
GGCGGCGCCG AGCTGGAGGT CGTCGACGTC CAGAAGGTCG CCCGCAAGCT GTGGGTGCAC
CAGGTCCGCG TGGTCTCCGG CGAGATCGCC GAGGGCGAGA AGGTCGAGGC CCGCGTCGAC
GCCGAGTGGC GCGTCGGGGC CCGCCAGGGG CACTCGGGCA CGCACGTCGT GCACGCCGCC
CTGCGCCAGG TGCTCGGCCC GTCCGCGCTC CAGTCCGGCT CGTACAACAA GCCCGGCTAC
CTGCGGCTCG ACTTCGCCTG GACCGGCGGC CTGTCCGAGT CCACGCGCAG CGAGATCGAG
GAGGTCTCGA ACCTGGCGGT CCGCAAGGAC CTGCCGGTGA GCGTGGTCTA CACCGACATG
GGCGGCGCCC AGGAGATGGG CGCGGTCGCG CTGTTCGGCG AGACCTACGA CGAGACCGTG
CGCGTGGTCG AGATCGGCGG CCGGTGGTCG CGCGAGCTGT GCGGTGGCAC GCACGTCGAG
CACTCCTCGC AGATCGGCCC GATCACCGTC ATCGGCGAGT CGTCGGTCGG CTCCGGGGTG
CGACGGCTGG AGGCCTACGT CGGCATCGAG GCGTTCAAGT ACCTGGCCCG GGAGCGGGCG
CTGGTGCAGA ACGTGGCCGC CATGCTGAAG GTGCCCGACG CCGAGGTGCC CGGCCGCGTC
GAGGCGCTGG TCGAGCGGCT GCGCGTGGCC GAGAAGGAGC TGGAGAAGGT CCGCTCCGCC
CAGCTCGTGG CCTCGGCCGG GTCGCTGGTC TCGCAGGCGC TGGACGTGCG CGGCGTGTCC
GTGCTCGCGC TGGCCCTGCC CGAGGGCACC TCCGGCGCCG ACGTGCGCGC GATCGCCAGC
GAGGTGCGCG GACGGATGGC CGACAAGCCC GGCGTGGTCG CGCTGTTCGC CCCGGACGGC
GACAAGGTCA GCTTCGTCGT CGCCACCACG GCGGGCGCCC GCGACCTTGG CCTCGCCGCG
GGCAAGCTGG TGCCCGCCTT CGCGCCCGCC GTCGGCGGCC GTGGCGGCGG CAAGCCCGAC
CTGGCCCAGG GCGGTGGCAC CAACCCGGCG GGCGTGCCGC AGGCCGTGGC CGCCGTGCTC
GCCGAGGTGG AACGCGCCCT TGAGCAGCGG TGA
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| Protein sequence | MQTHEIIKRF REHFENAGHA VVPSASLLLD DPNLLFVNAG MVPFKPYFLG EAPSPHKRAT
SVQKCVRTPD IDEVGKTTRH LTFFQMAGNF SFGDYFKEDA IRLAWDLVTK SQDDGGYGFD
PERLWVTVYL DDDEAADLWQ KIAGLPPERI QRRDVEDNYW SMGVPGPCGP CSEIYYDRGP
EFGAEGGPVV DEDRYLEIWN LVFMQNERGA GGAKRDYPIL GELPSKNIDT GMGVERVAFL
LQGVDNVYET DLVRAVITKA EELSGRKYGD NPTDDVRFRV IADHARSGVL LVGDGVTPGN
EARGYVLRRL LRRIVRSSRL LGVTEPVLQT FAAVVRDTMG PSYPELVSGF ARIEQVLKAE
EDTFLRTLDA GSRIFETAAG TVKSQGRAIL PGDKAFQLHD TYGFPIDLTL EMASEAGLTV
DEDGFRKLMA EQRARAKADA AGKKTGHGDQ TVYRELLELG ATEFTGYTEL ASEAVLRGIV
SGGKRVKSAR EGDIVEVVLD RTPLYAESGG QESDAGVIVS GGAELEVVDV QKVARKLWVH
QVRVVSGEIA EGEKVEARVD AEWRVGARQG HSGTHVVHAA LRQVLGPSAL QSGSYNKPGY
LRLDFAWTGG LSESTRSEIE EVSNLAVRKD LPVSVVYTDM GGAQEMGAVA LFGETYDETV
RVVEIGGRWS RELCGGTHVE HSSQIGPITV IGESSVGSGV RRLEAYVGIE AFKYLARERA
LVQNVAAMLK VPDAEVPGRV EALVERLRVA EKELEKVRSA QLVASAGSLV SQALDVRGVS
VLALALPEGT SGADVRAIAS EVRGRMADKP GVVALFAPDG DKVSFVVATT AGARDLGLAA
GKLVPAFAPA VGGRGGGKPD LAQGGGTNPA GVPQAVAAVL AEVERALEQR
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