| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5185 |
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| Symbol | |
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| ID | 8329387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6177895 |
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| End bp | 6178818 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644945624 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_003102852 |
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| Protein GI | 256379192 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.264459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCG TTGCGCAGGC CCCTGCGCGG ACTCCGCGGC AGGTCGTCGG CGCGTACGTC
GCGCTGACGA AGCCGAGGGT GATCGAGCTG CTGCTGATCA CCACCATCCC GGCGATGCTG
CTGGCCGAGC GCGGGCTGCC GCCGCTGTGG CTCATCGCGT GCACGCTCGC GGGCGGGACG
CTCGCCGCGG GCAGCGCCAA CGCCCTGAAC TGCTACATCG ACGCCGACAT CGACTCGGTG
ATGAAGCGCA CGGGCAGCAG GCCGCTGGCC AAGAACTCGA TCCCACCGCG CAACGCGCTG
ATCTTCGGCG TCGTGCTCGG GGTGGTGTCG TTCGCGTTCC TGTGGATCAC CACGAACCTG
ATGTCCGCGG TGTTCGCCGT CGCGACGATC CTGTTCTACA TCTTCGTGTA CACGCTGGTG
CTCAAGCGCC GGACCTCCCA GAACATCATC TGGGGCGGCC TCGCGGGCTG TATGCCGGTG
GTCATCGGCT GGTCGGCCGT GACCGGCACG GTGGAGCTGC CCGCGCTGGC GATGTTCGGC
GTGATCTTCT TCTGGACGCC GCCGCACACC TGGGCGCTCG CGATGAAGTT CAAGGAGGAC
TACGCGCGGG CAGGCGTGCC GATGCTCCCG GTGGTCGCCA CCGCGCAGCA GGTGACCAGG
CAGATCGTCA TCTACTCCTG GGCGACGGTG CTGTGCAGCC TGCTGCTGGC GCCGGTGACG
AGCTGGATCT ACGTGGGCGT GGCCCTGGCG TCGGGCGTGT GGTTCGGGGT GTTCGCGCAC
CGGCTGCACG GGGTGGTCCG TAAGGGCGGG TCGACCAACA CGATGAAGTT CTTCCACATG
TCGAACCTGT ACCTGACCCT GGTGTTCTGC GGCCTGGCCG TGGACGCGGT GGTCGGCCTG
CCGGTGCTCG GGTGGCCGTT CTGA
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| Protein sequence | MSAVAQAPAR TPRQVVGAYV ALTKPRVIEL LLITTIPAML LAERGLPPLW LIACTLAGGT
LAAGSANALN CYIDADIDSV MKRTGSRPLA KNSIPPRNAL IFGVVLGVVS FAFLWITTNL
MSAVFAVATI LFYIFVYTLV LKRRTSQNII WGGLAGCMPV VIGWSAVTGT VELPALAMFG
VIFFWTPPHT WALAMKFKED YARAGVPMLP VVATAQQVTR QIVIYSWATV LCSLLLAPVT
SWIYVGVALA SGVWFGVFAH RLHGVVRKGG STNTMKFFHM SNLYLTLVFC GLAVDAVVGL
PVLGWPF
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