Gene Amir_5177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5177 
Symbol 
ID8329379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6169708 
End bp6171339 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content75% 
IMG OID644945616 
Productprotein of unknown function DUF885 
Protein accessionYP_003102844 
Protein GI256379184 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCGGG TAATTTCCGT GCACGTGACC GAATCCACGA CCCACGCGCA GCTAGTCGAC 
GGCTTCCTCC GCTGGCACTT CGACGCGAAC CCCGGTTCGG CGGCCATGCT CGGCTCGCTC
GACCACGACC GGACGCTCGG CGACTTCACC GCCGAGTCCT TCCTCGCCCA GGAGCGGGAG
TCGCTGACCT GGCTCGACCG GTTCAGCGAG GCCACCCCGA CCGACCCCGC CGACGCGGTG
GACCGGGCGC TGGTGGTGTC GGTGCTGCGC GGGGCGCGCG CCAAGGCCGA GTGGCCGTCG
TGGCGGCGTG ACCCGTCCGT GTACACCGGC GCGGTGCTGT TCCCGCTGTT CTCGGCGTTC
CTGCACCGGC TGCGGCCCGA GGCCGAGCTG GTCGGGTCGG TGCTGGCCAG GCTCGCCGAG
GTGCCCTCGG TGCTGGCGGC GTGCCGGGCG AACCTGTCGC CGGAGCTGGC CGCGCCGAAG
ATCGTGCTGC GGGGCGCGGC GCAGGCCCGC GCCGGGCGGG CGTTCCTGAC GGGGACGCTG
CCGTCCGAGG TGGCGGACCC CGACCTGCGG GCGCGGGTCG CCGAGGCGGC CGAACCGGCG
GCGGCGGCGT TCGACGGGCT GGCGGCCTTC CTGGAGTCGT TCGCGGAGAC CGCGCGCGGC
GACTGGCGGA TGGGCGAGGC GCTGTACTCG CGGCTGCTGA CCGAGCAGGA GCTGCTCGGC
TACGGGGCCT CGGAGCTGCA CGAGCGCGGC CGGTCCGCGT ACGCGGAGCT GGAGGCCGAG
ATGCGGGCGC TGGCCGGGGC CGACGACTGG CACTCGGTGA TGCTCGCCCT GCAGGAGGAC
CACCCGCCGA CGCCGGAGGC GATGCGCGCC GAGTACGAGG CGGAGACGCT GCGGGCGCGG
GAGTTCCTCG TCGAGCGGGG GCTGGTGACG CTGGCCGACG GCGAGGAGTG CCGGGTCGTG
CCCTCCCCCG CGTTCCAGCG GCCGGTGCTG TCGGTGGCCT CGTACATGCA GCCGCCGCCG
CTGACCGGCT CGCGGCTCGG GCACTTCTTC GTGCCCACCC CGCCCGAGGC GTTCACCGCC
GACCAGGTCG CGCAGCGGCT GCGCACCAAC TCGCGGTCGC AGCTGGCGAC GATCGCGGTG
CACGAGGCGT ACCCCGGCCA CCACTGGCAC CTGTCGTGGC TGGCGACGCA GGACCGGGCC
GTGCGCAAGG TGTTCCGGAC GCCGTACTTC TCCGAGGGCT GGGCGCTGTA CTCGGAGAAG
CTGCTGCGCG AGGAGGGGTA CTTCACCGAG CGGGCGCAGG AGCTGGCGCA CGTGGAGGCG
CGGCTGTTCC GGGCGGCGCG GATGGTGGTG GACACGGCGC TGCACTGCGG CGACATGAGC
GTGGCCGAGG CCGAGGAGTT CATGGTGACG AAGGCGTCGC TGACGCCGGG GACCGCCGAG
GGCGAGGTGA CGCGGTACTG CGCGTGGCCG ACGCAGGCGC CGTCGTACCT GACCGGGGCG
CTGGAGATCG AGCGGATCCG GGGCGAGTAC CTGGCCGAGG GGCGCGGGAC GCTGCGGGAG
TTCCACGACC GGATCGCGGG GTCGGGCGCG CTGCCGCTGG GGTTGGCGCG GCAGGTCGTG
CTGGGGCGGT AG
 
Protein sequence
MLRVISVHVT ESTTHAQLVD GFLRWHFDAN PGSAAMLGSL DHDRTLGDFT AESFLAQERE 
SLTWLDRFSE ATPTDPADAV DRALVVSVLR GARAKAEWPS WRRDPSVYTG AVLFPLFSAF
LHRLRPEAEL VGSVLARLAE VPSVLAACRA NLSPELAAPK IVLRGAAQAR AGRAFLTGTL
PSEVADPDLR ARVAEAAEPA AAAFDGLAAF LESFAETARG DWRMGEALYS RLLTEQELLG
YGASELHERG RSAYAELEAE MRALAGADDW HSVMLALQED HPPTPEAMRA EYEAETLRAR
EFLVERGLVT LADGEECRVV PSPAFQRPVL SVASYMQPPP LTGSRLGHFF VPTPPEAFTA
DQVAQRLRTN SRSQLATIAV HEAYPGHHWH LSWLATQDRA VRKVFRTPYF SEGWALYSEK
LLREEGYFTE RAQELAHVEA RLFRAARMVV DTALHCGDMS VAEAEEFMVT KASLTPGTAE
GEVTRYCAWP TQAPSYLTGA LEIERIRGEY LAEGRGTLRE FHDRIAGSGA LPLGLARQVV
LGR