Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5177 |
Symbol | |
ID | 8329379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6169708 |
End bp | 6171339 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644945616 |
Product | protein of unknown function DUF885 |
Protein accession | YP_003102844 |
Protein GI | 256379184 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGCGGG TAATTTCCGT GCACGTGACC GAATCCACGA CCCACGCGCA GCTAGTCGAC GGCTTCCTCC GCTGGCACTT CGACGCGAAC CCCGGTTCGG CGGCCATGCT CGGCTCGCTC GACCACGACC GGACGCTCGG CGACTTCACC GCCGAGTCCT TCCTCGCCCA GGAGCGGGAG TCGCTGACCT GGCTCGACCG GTTCAGCGAG GCCACCCCGA CCGACCCCGC CGACGCGGTG GACCGGGCGC TGGTGGTGTC GGTGCTGCGC GGGGCGCGCG CCAAGGCCGA GTGGCCGTCG TGGCGGCGTG ACCCGTCCGT GTACACCGGC GCGGTGCTGT TCCCGCTGTT CTCGGCGTTC CTGCACCGGC TGCGGCCCGA GGCCGAGCTG GTCGGGTCGG TGCTGGCCAG GCTCGCCGAG GTGCCCTCGG TGCTGGCGGC GTGCCGGGCG AACCTGTCGC CGGAGCTGGC CGCGCCGAAG ATCGTGCTGC GGGGCGCGGC GCAGGCCCGC GCCGGGCGGG CGTTCCTGAC GGGGACGCTG CCGTCCGAGG TGGCGGACCC CGACCTGCGG GCGCGGGTCG CCGAGGCGGC CGAACCGGCG GCGGCGGCGT TCGACGGGCT GGCGGCCTTC CTGGAGTCGT TCGCGGAGAC CGCGCGCGGC GACTGGCGGA TGGGCGAGGC GCTGTACTCG CGGCTGCTGA CCGAGCAGGA GCTGCTCGGC TACGGGGCCT CGGAGCTGCA CGAGCGCGGC CGGTCCGCGT ACGCGGAGCT GGAGGCCGAG ATGCGGGCGC TGGCCGGGGC CGACGACTGG CACTCGGTGA TGCTCGCCCT GCAGGAGGAC CACCCGCCGA CGCCGGAGGC GATGCGCGCC GAGTACGAGG CGGAGACGCT GCGGGCGCGG GAGTTCCTCG TCGAGCGGGG GCTGGTGACG CTGGCCGACG GCGAGGAGTG CCGGGTCGTG CCCTCCCCCG CGTTCCAGCG GCCGGTGCTG TCGGTGGCCT CGTACATGCA GCCGCCGCCG CTGACCGGCT CGCGGCTCGG GCACTTCTTC GTGCCCACCC CGCCCGAGGC GTTCACCGCC GACCAGGTCG CGCAGCGGCT GCGCACCAAC TCGCGGTCGC AGCTGGCGAC GATCGCGGTG CACGAGGCGT ACCCCGGCCA CCACTGGCAC CTGTCGTGGC TGGCGACGCA GGACCGGGCC GTGCGCAAGG TGTTCCGGAC GCCGTACTTC TCCGAGGGCT GGGCGCTGTA CTCGGAGAAG CTGCTGCGCG AGGAGGGGTA CTTCACCGAG CGGGCGCAGG AGCTGGCGCA CGTGGAGGCG CGGCTGTTCC GGGCGGCGCG GATGGTGGTG GACACGGCGC TGCACTGCGG CGACATGAGC GTGGCCGAGG CCGAGGAGTT CATGGTGACG AAGGCGTCGC TGACGCCGGG GACCGCCGAG GGCGAGGTGA CGCGGTACTG CGCGTGGCCG ACGCAGGCGC CGTCGTACCT GACCGGGGCG CTGGAGATCG AGCGGATCCG GGGCGAGTAC CTGGCCGAGG GGCGCGGGAC GCTGCGGGAG TTCCACGACC GGATCGCGGG GTCGGGCGCG CTGCCGCTGG GGTTGGCGCG GCAGGTCGTG CTGGGGCGGT AG
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Protein sequence | MLRVISVHVT ESTTHAQLVD GFLRWHFDAN PGSAAMLGSL DHDRTLGDFT AESFLAQERE SLTWLDRFSE ATPTDPADAV DRALVVSVLR GARAKAEWPS WRRDPSVYTG AVLFPLFSAF LHRLRPEAEL VGSVLARLAE VPSVLAACRA NLSPELAAPK IVLRGAAQAR AGRAFLTGTL PSEVADPDLR ARVAEAAEPA AAAFDGLAAF LESFAETARG DWRMGEALYS RLLTEQELLG YGASELHERG RSAYAELEAE MRALAGADDW HSVMLALQED HPPTPEAMRA EYEAETLRAR EFLVERGLVT LADGEECRVV PSPAFQRPVL SVASYMQPPP LTGSRLGHFF VPTPPEAFTA DQVAQRLRTN SRSQLATIAV HEAYPGHHWH LSWLATQDRA VRKVFRTPYF SEGWALYSEK LLREEGYFTE RAQELAHVEA RLFRAARMVV DTALHCGDMS VAEAEEFMVT KASLTPGTAE GEVTRYCAWP TQAPSYLTGA LEIERIRGEY LAEGRGTLRE FHDRIAGSGA LPLGLARQVV LGR
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