Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5174 |
Symbol | |
ID | 8329376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6166878 |
End bp | 6168455 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644945613 |
Product | SSS sodium solute transporter superfamily |
Protein accession | YP_003102841 |
Protein GI | 256379181 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGCCA ACACGGCGGT CAACCTGGGC GTGTTCGGCG TCTTCGTGCT GATCACGCTG TTCGTGGTGT ACCGGGCGGG CACCCGGAAC GCGAGCGCGT CCGACTACTA CGCCGCCGGG AGCAGCTTCA CCGGCCCGCA GAACGGCGTC GCGCTCTCCG GCGACTTCCT TTCCGCCGCG TCCTTCCTGG GCATTTCCGG GAGCATCGCG GTGAACGGGT ACGACGGGTT CCTGTACTCC ATCGGCTGGG TCGTGTCCTG GTTGGTGGGG CTCATGCTCA TCGCCGAGCG GCTGCGCAAC ACCGGCCGGT TCACCCTCGG GGACGTGCTG GCGTTCCGGA TGCGCCAGCG GCCCGTCCGC GCGGCCACCG CCAACGTGAC CCTCGTCATC TCGCTCTTCT ACATGATCGC GCAGATGGCG GGCGCGGGCG CGCTCGTCTC GCTGCTGCTG GACGTGCAGA ACGAGGCCGG GCAGGCGCTG GTCATCGCGG TCGTCGGCGT GGTCATGGTG CTGTACGTGC TGGTCGGCGG CATGAAGGGC ACGACCTGGG TGCAGATCAT CAAGGGCGTC CTGCTGCTGC TGTGCGTGAC CATGCTGACG GTGTTCCTGC TCGGCAAGTT CGGGTTCAGC CTGTCGGCGC TGCTGGAGAC CGCGAGCAGG CGCTCACCGC TGGGCGACGA GGTTCTGGCG CCCGGCGCGC GCTACGGCGG CTCCGCGATC GCGCACATGG ACTTCATCTC GCTGGCGCTG GCGCTGGTGC TGGGCACCGC GAGCCTGCCG CACGTGCTGA TGCGCTTCTA CACCGTGCCG AACGCCCGCG AGGCGCGGCG CTCGGTGGTG TGGGCGACCT CGCTGATGGC CACGTTCTAC CTGTGCACGC TGGTCATCGG GTTCGGCGCG CTGGCCCTGG TCGGCGAGGA CTCGATCAGC AAGGCGCCGG GCGGCGAGAA CTCGGCCGCG CCGCTGCTGG CGTTCCACAT CGGCGGGACG GTGCTGCTGG GCATCGTCTG CGCGGTGGCG TTCGCGACGA TCCTGGCGGT GGTGGCCGGT CTGACCATGA CCGCGTCGGC CTCGTTCGCG CACGACGTGT ACGCGAACGT CATCAAGCGC GGGCAGGCCG ACCCGCGCTC CGAGGTGCGG GTCGCCCGGT TGACCGCCGT GGTGGTCGGC GTGCTGGCGA TCGGCGGCGG CATCGTGGCC AACGGGCAGA ACGTGGCGTT CCTGGTGGCG CTGGCGTTCG CGCTGGCCGC GTCGGCGAAC CTGTCCACGA TCGTGTACTC GATGTTCTGG AAGCGGTTCA ACACCAACGG CACGCTGTGG GCGCTGTACG GCGGCCTGGG GTCGTGCGTG GTGCTGATCG CGTTCTCCCC CGCCGTGTCC GGGTCGCCGA CGGCGATCTT CCCGCACGTG GACTTCCACT GGTTCCCGCT GGACAACCCC GGCCTGGTGT CGATCCCGCT GTCGTTCCTG TGCGGCTGGC TGGGGACGAT CCTGTCCAAG GAGAAGGCGG ACCCTGCGAA GCAGGCCGAG ATGGAGGTCC GGTCGCTGAC CGGGATCGGG TCCGGGTTGC AGCCCTGA
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Protein sequence | MGANTAVNLG VFGVFVLITL FVVYRAGTRN ASASDYYAAG SSFTGPQNGV ALSGDFLSAA SFLGISGSIA VNGYDGFLYS IGWVVSWLVG LMLIAERLRN TGRFTLGDVL AFRMRQRPVR AATANVTLVI SLFYMIAQMA GAGALVSLLL DVQNEAGQAL VIAVVGVVMV LYVLVGGMKG TTWVQIIKGV LLLLCVTMLT VFLLGKFGFS LSALLETASR RSPLGDEVLA PGARYGGSAI AHMDFISLAL ALVLGTASLP HVLMRFYTVP NAREARRSVV WATSLMATFY LCTLVIGFGA LALVGEDSIS KAPGGENSAA PLLAFHIGGT VLLGIVCAVA FATILAVVAG LTMTASASFA HDVYANVIKR GQADPRSEVR VARLTAVVVG VLAIGGGIVA NGQNVAFLVA LAFALAASAN LSTIVYSMFW KRFNTNGTLW ALYGGLGSCV VLIAFSPAVS GSPTAIFPHV DFHWFPLDNP GLVSIPLSFL CGWLGTILSK EKADPAKQAE MEVRSLTGIG SGLQP
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