Gene Amir_5174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5174 
Symbol 
ID8329376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6166878 
End bp6168455 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content70% 
IMG OID644945613 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_003102841 
Protein GI256379181 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCCA ACACGGCGGT CAACCTGGGC GTGTTCGGCG TCTTCGTGCT GATCACGCTG 
TTCGTGGTGT ACCGGGCGGG CACCCGGAAC GCGAGCGCGT CCGACTACTA CGCCGCCGGG
AGCAGCTTCA CCGGCCCGCA GAACGGCGTC GCGCTCTCCG GCGACTTCCT TTCCGCCGCG
TCCTTCCTGG GCATTTCCGG GAGCATCGCG GTGAACGGGT ACGACGGGTT CCTGTACTCC
ATCGGCTGGG TCGTGTCCTG GTTGGTGGGG CTCATGCTCA TCGCCGAGCG GCTGCGCAAC
ACCGGCCGGT TCACCCTCGG GGACGTGCTG GCGTTCCGGA TGCGCCAGCG GCCCGTCCGC
GCGGCCACCG CCAACGTGAC CCTCGTCATC TCGCTCTTCT ACATGATCGC GCAGATGGCG
GGCGCGGGCG CGCTCGTCTC GCTGCTGCTG GACGTGCAGA ACGAGGCCGG GCAGGCGCTG
GTCATCGCGG TCGTCGGCGT GGTCATGGTG CTGTACGTGC TGGTCGGCGG CATGAAGGGC
ACGACCTGGG TGCAGATCAT CAAGGGCGTC CTGCTGCTGC TGTGCGTGAC CATGCTGACG
GTGTTCCTGC TCGGCAAGTT CGGGTTCAGC CTGTCGGCGC TGCTGGAGAC CGCGAGCAGG
CGCTCACCGC TGGGCGACGA GGTTCTGGCG CCCGGCGCGC GCTACGGCGG CTCCGCGATC
GCGCACATGG ACTTCATCTC GCTGGCGCTG GCGCTGGTGC TGGGCACCGC GAGCCTGCCG
CACGTGCTGA TGCGCTTCTA CACCGTGCCG AACGCCCGCG AGGCGCGGCG CTCGGTGGTG
TGGGCGACCT CGCTGATGGC CACGTTCTAC CTGTGCACGC TGGTCATCGG GTTCGGCGCG
CTGGCCCTGG TCGGCGAGGA CTCGATCAGC AAGGCGCCGG GCGGCGAGAA CTCGGCCGCG
CCGCTGCTGG CGTTCCACAT CGGCGGGACG GTGCTGCTGG GCATCGTCTG CGCGGTGGCG
TTCGCGACGA TCCTGGCGGT GGTGGCCGGT CTGACCATGA CCGCGTCGGC CTCGTTCGCG
CACGACGTGT ACGCGAACGT CATCAAGCGC GGGCAGGCCG ACCCGCGCTC CGAGGTGCGG
GTCGCCCGGT TGACCGCCGT GGTGGTCGGC GTGCTGGCGA TCGGCGGCGG CATCGTGGCC
AACGGGCAGA ACGTGGCGTT CCTGGTGGCG CTGGCGTTCG CGCTGGCCGC GTCGGCGAAC
CTGTCCACGA TCGTGTACTC GATGTTCTGG AAGCGGTTCA ACACCAACGG CACGCTGTGG
GCGCTGTACG GCGGCCTGGG GTCGTGCGTG GTGCTGATCG CGTTCTCCCC CGCCGTGTCC
GGGTCGCCGA CGGCGATCTT CCCGCACGTG GACTTCCACT GGTTCCCGCT GGACAACCCC
GGCCTGGTGT CGATCCCGCT GTCGTTCCTG TGCGGCTGGC TGGGGACGAT CCTGTCCAAG
GAGAAGGCGG ACCCTGCGAA GCAGGCCGAG ATGGAGGTCC GGTCGCTGAC CGGGATCGGG
TCCGGGTTGC AGCCCTGA
 
Protein sequence
MGANTAVNLG VFGVFVLITL FVVYRAGTRN ASASDYYAAG SSFTGPQNGV ALSGDFLSAA 
SFLGISGSIA VNGYDGFLYS IGWVVSWLVG LMLIAERLRN TGRFTLGDVL AFRMRQRPVR
AATANVTLVI SLFYMIAQMA GAGALVSLLL DVQNEAGQAL VIAVVGVVMV LYVLVGGMKG
TTWVQIIKGV LLLLCVTMLT VFLLGKFGFS LSALLETASR RSPLGDEVLA PGARYGGSAI
AHMDFISLAL ALVLGTASLP HVLMRFYTVP NAREARRSVV WATSLMATFY LCTLVIGFGA
LALVGEDSIS KAPGGENSAA PLLAFHIGGT VLLGIVCAVA FATILAVVAG LTMTASASFA
HDVYANVIKR GQADPRSEVR VARLTAVVVG VLAIGGGIVA NGQNVAFLVA LAFALAASAN
LSTIVYSMFW KRFNTNGTLW ALYGGLGSCV VLIAFSPAVS GSPTAIFPHV DFHWFPLDNP
GLVSIPLSFL CGWLGTILSK EKADPAKQAE MEVRSLTGIG SGLQP