Gene Amir_5152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5152 
Symbol 
ID8329354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6140669 
End bp6140995 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content72% 
IMG OID644945591 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_003102819 
Protein GI256379159 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCG TCCGGGTGTG CTCGCTCGCC GACCTGACCG ACCGCGTGCC GGTCGCGTTC 
CAGGTCGGCG ACGAGCAGGT CCCGGTCGTG CTGGTCCGGC AGGGGGACGC CGTGCACGCG
CTGCGCGACG AGTGCAGCCA CGCCGCGATC TCCCTCAGCG AGGGCGAGGT GACCCGCAAG
GGCATCGAGT GCTGGCTGCA CGGGTCGTGC TTCGACCTGG CCACCGGCAA GCCCTCCTCG
CCGCCCGCGT CCGACCCGGT CGACGTGTTC GCCGTGGAAC TGCGCGGTGG TGACGTCCAC
GTGGACGTCA CCACCACCAC CAACTGA
 
Protein sequence
MTAVRVCSLA DLTDRVPVAF QVGDEQVPVV LVRQGDAVHA LRDECSHAAI SLSEGEVTRK 
GIECWLHGSC FDLATGKPSS PPASDPVDVF AVELRGGDVH VDVTTTTN