| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5085 |
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| Symbol | |
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| ID | 8329283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6058758 |
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| End bp | 6059474 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945521 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_003102753 |
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| Protein GI | 256379093 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGAGCA CGACGATCCC CGAGTACCGG CGGGACCCCG GGTCCCAGCC GCCGGTGGAC
TTCCCGGCGT ACCGCTCCAA CGCGCTGCGC GCCCCGCGCA GACCGCTGGT GCTCCTGCCG
CAGCGGCTCA CCGAGGTCAC CGGGCCGCTG CTCGGCGCGG ACCGGGTGGG GGAGCACGAC
CACGACCTCA CCGCCGGTCA CCCCGGTGAG CCGATCGGGC AGCGGATCAC CCTGTCCGGG
CGAGTGCTCG ACGGTGGTGG GCGGCCGGTG ACCGGCGCGC TCGTGGAGGT GTGGCAGGCG
AACGCGGCCG GTCGGTACCG GCACGACGCC GACCGGCACC CCGCGCCGCT CGACCCGAAC
TTCACCGGGG CCGGGCGGTG CGTCACGGAC TCGACCGGGG CGTACTCGTT CACCACCGTC
CGGCCGGGCG CGTACCCGTG GCGCAACCAC GACAACGCCT GGCGGCCCGC GCACGTCCAC
TTCTCGCTGT TCGGCGTCGC GTTCACCCAG CGGCTCATCA CCCAGGTGTA CTTCCCCGGC
GACCCGCTGC TGCCGCTGGA CCCGGTGTTC GACTCGGTGC GCGACGAGGC GGCCCGCGCG
TCGTTGGTGG CCGCGTTCGA CCTGGGCCGC ACGGTGCCCG AGCGGTCGTT GGGCTACCGC
TGGGACATCG TGCTGCGCGG CAAGGACCCC ACACCGCTGG GGGACGACGA TGACTGA
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| Protein sequence | MPSTTIPEYR RDPGSQPPVD FPAYRSNALR APRRPLVLLP QRLTEVTGPL LGADRVGEHD
HDLTAGHPGE PIGQRITLSG RVLDGGGRPV TGALVEVWQA NAAGRYRHDA DRHPAPLDPN
FTGAGRCVTD STGAYSFTTV RPGAYPWRNH DNAWRPAHVH FSLFGVAFTQ RLITQVYFPG
DPLLPLDPVF DSVRDEAARA SLVAAFDLGR TVPERSLGYR WDIVLRGKDP TPLGDDDD
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