| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5080 |
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| Symbol | |
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| ID | 8329278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6056116 |
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| End bp | 6056865 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945516 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_003102748 |
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| Protein GI | 256379088 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACT TTGTCCAGTC GCTGGCCAGG GGGCTGCTGG TGATCAGGGC GTTCGACGCC
GACCACCCGG AGCTCACGCT CAGCCAGGTC GCCCGGATCA CCGGGTTGAC CAGGGCGGCG
GCGCGGCGGT TCCTGCACAC GCTGGTCGCG CTCGGGTACG TGCGCTCGGA CGGCAGGCTG
TTCGCGCTGC GCCCGCAGGT GCTCCAGCTC GGGCACGCCT ACCTGTCCAG CCTGTCCCTG
CCCGCGCTCG CCCAGCCGCA CCTGGAGAAG CTGGCCGCGC AGGTCCGCGA GTCGTGCTCC
ATGTCGGTGC TCGACGGCGA CCGGGTGGTG TACGTGGCGC GGGTGCCGAC GAAGCGGATC
ATGTCCGTGA CGATCAGCGT GGGCACCCGC TTCCCCGCGC ACGCGACCGC GATGGGCCGC
GTGCTGCTCG CCGCGCAGGA CCGGGCGTGG CTGGACGAGT ACCTGGCGAA GGCGCGGCTG
GAGCGGTTGA CGTCGCGCAC GGTCGTCGAC GCCCGGCGGT TGCGGCAGGA GCTGGACGTG
GTGCGCGGGC AGGGCTGGGC GCTGGTGGAC CAGGAGCTGG AGGACGGCCT GCGCTCGCTG
GCGGTCCCGG TGCGCGGCCC GCGCGGGGTG GTGGCGGCGG TGAACGTCTC CGCCCACACC
AGCCGGGGCA ACGCCCTGGC CGTCCGCGAC GACCTCCTGG CGCCGCTCCA GGCGGCGGCG
AAGCTGATCG AGGAGGACCT GAGGCAGTGA
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| Protein sequence | MADFVQSLAR GLLVIRAFDA DHPELTLSQV ARITGLTRAA ARRFLHTLVA LGYVRSDGRL
FALRPQVLQL GHAYLSSLSL PALAQPHLEK LAAQVRESCS MSVLDGDRVV YVARVPTKRI
MSVTISVGTR FPAHATAMGR VLLAAQDRAW LDEYLAKARL ERLTSRTVVD ARRLRQELDV
VRGQGWALVD QELEDGLRSL AVPVRGPRGV VAAVNVSAHT SRGNALAVRD DLLAPLQAAA
KLIEEDLRQ
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