Gene Amir_5078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5078 
Symbol 
ID8329276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6054346 
End bp6054978 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content76% 
IMG OID644945514 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003102746 
Protein GI256379086 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAGC TGGTGGTCAC CACCTTCCAG TCGCTGGACG GCGTCGTGCA GGGCCCCGGC 
GGGCCGGACG AGGACCGGTC GGGCGGGTTC GAGCGCGGCG GGTGGCTGGT GCCGTTCTAC 
GAGGACGGGC TGGGCGAGCG GATGGCCGGG GTCGTGCGGC GGGCGGGGGC GCTGCTGCTC 
GGGCGGCGGA CGTACGACAT CTTCGCCACG AGCTGGCCCC TGGCGCCCGA GGACGACCCG 
ATCGGCGAGC GGTTCAACGC CATCCCCAAG CACGTGGTGT CGAGCACGCC GCTGACACCG 
GAGTGGCGGG GCGCGAGCCT GCTGGGCGGG GAGCTGGCGA CGGCGGTCGC GGCGCTGAAG 
GCCGACGACG GCGGGGAGGG CGGGGAGCTG CAGGTGCACG GGAGCGGGAC GCTCGTGCGG 
GCGCTGCTGG AGCACGGCCT GGTGGACGAA CTGCAGGTGA TCACGTTCCC GGTGGTGGTG 
GGGGCGGGCA AGCGGCTGTT CGGGGAGGCG CCGGTGACCT TCGAGCTGCG CTCGCTGGAC 
CGGACGGCGG GCGGGGCGGT GGTGGCCGGC TACGCGAACG CGGCGGCCGG GTTGGCGCAG 
GGGGCGCTGG GGCCGGAGAC GGGGAACTGG TGA
 
Protein sequence
MRKLVVTTFQ SLDGVVQGPG GPDEDRSGGF ERGGWLVPFY EDGLGERMAG VVRRAGALLL 
GRRTYDIFAT SWPLAPEDDP IGERFNAIPK HVVSSTPLTP EWRGASLLGG ELATAVAALK 
ADDGGEGGEL QVHGSGTLVR ALLEHGLVDE LQVITFPVVV GAGKRLFGEA PVTFELRSLD 
RTAGGAVVAG YANAAAGLAQ GALGPETGNW