| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5048 |
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| Symbol | |
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| ID | 8329246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6005410 |
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| End bp | 6006147 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945484 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003102716 |
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| Protein GI | 256379056 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0441306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACT TCACCGGCAA GACCGTCCTC GTCACCGGCG CGACCGGCGC CCTCGGCGCC
GAGCTGTGCG CGAAGTTCGC CGCGGCGGGC GCGAACACCG TCGTCGCGGG CAGGACCGGC
TTCGAGGAGC TGGCCGCCGC GCTCGACGGC CCCGCGCTGG GCGTGCGGCT CGACGTCACC
AGCGAGTCCG ACTGGGCCGA GGCGATCACC CGCGCCCAGG ACCGCTTCGG ACCGGTCGAC
GTCCTGGTCA ACAACGCCGC CCACCTGCGC ACCGGCACCA CCGAGGGCAT CCCGCTCGAC
GACTTCCGGC AGGTGCTCGA CGTCAACCTC ACCGGCGCGC TCCTGGGCAT CCGCGCGGTG
GCCCCGTCGA TGCGCCTGGC GGGCGGCGGG TCGATCGTGA ACGTGAACTC GATCGCGGGC
CTGGCCGCCG CGCCGGGACT GGTCGCCTAC AGCAGCAGCA AGTGGGCGCT GCGCGGCCTG
CTGCGCGCGG CGGCGGTGGA GCTGGCCGGT GACGGCATCC GGGTCAACGC GGTCCACCCC
GGCATCATCG AGACCCCGCT GGCGTACGGG CCGGACGGCG AGGAGCTGGT GCCGGTGGGC
GACTTCCCCA TCCCGCGCCG GGCGGACGTC GCGGAGATCG CGGACTTCGT GCTGTTCGCC
GCCTCGGACC GGGCGCGGTT CGCGACGGGC TCGGAGTTCG TGGCCGACGG CGGGTTCCTG
CTGGGTCCGG CGGCGTGA
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| Protein sequence | MNDFTGKTVL VTGATGALGA ELCAKFAAAG ANTVVAGRTG FEELAAALDG PALGVRLDVT
SESDWAEAIT RAQDRFGPVD VLVNNAAHLR TGTTEGIPLD DFRQVLDVNL TGALLGIRAV
APSMRLAGGG SIVNVNSIAG LAAAPGLVAY SSSKWALRGL LRAAAVELAG DGIRVNAVHP
GIIETPLAYG PDGEELVPVG DFPIPRRADV AEIADFVLFA ASDRARFATG SEFVADGGFL
LGPAA
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