Gene Amir_5033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5033 
Symbol 
ID8329231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5991988 
End bp5993157 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content72% 
IMG OID644945469 
Productresponse regulator receiver modulated serine phosphatase 
Protein accessionYP_003102701 
Protein GI256379041 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.185229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG TCGACCGCAT CAGCGTGCTT CTCGTCGAGG ACGACGAGGG CGACGCCATC 
CTGGTCGAAG CACTTCTGGA GGAGGTGGGG GCGGACGTCG AGCTGCTGCG CGCGCGCACG
TTGCGCGAGG CCATGACGCA GCTGTCCGGC GCGGACTGCG TCCTGCTCGA CCTCGGACTC
CCCGACACCA CCGGCCTTGA CGGGCTGCTG AACCTGCTGG CCCAGTCCGC GCCCGCCGCC
ATCATCGTGC TGACCGGGCT CAACGACGAG CACCAGGGGA TGCGCGCGGT CGCCGCGGGC
GCCGAGGACT ACCTCGTCAA GGGGCAGGTC GACGGCGCGG CGCTGCTGCG CGGCATCCGG
TACGCGGTGG GCCGCAAGCA GGCCGAGGAG ACCCAGCGGC AGCTGCGGGA CGAGAAGCTG
CACGCGGCCG AGAAGACCCG CCTGGAGCGC GGCCTGCTGC CGTCGCCGCT GCTGCGCGGA
CCGGCGCCGC TGGTGAAGGA GCGGTACCGG CCAGGCGGCA GCCGGATGCT GCTGGGCGGC
GACTTCTACG ACACCGTGCA GGCGCACGAC GGCACCCTGC ACGTGATCAT CGGCGACGTG
TGCGGCCACG GGCCGGACGA GGCCGCGCTG GGCGTGCTGC TGCGGATAGC GTGGCGCGCG
CTGCTGCTGG CCGAGCAGAC CCCCGAGCGG GTGCTGCACA CGATGCACGA GCTGCTGGAG
CTGGAGCGGC ACCAGCCGGG GCTGTTCACC ACCGCGTGCA TGATCTCGGT GGCCCCCGAC
CGGCGGTCCG CGCGGGTGTT CCTGGCCGGG CACCCCGAGC CGATCCTGAT GGCGGACGAC
AAGATCGTCG AGCTGCCCAG GACGCGCGCG GGGCTGCCGC TGGGCGTGCT GCCGGACAGC
GAGTGGGACG CGCTGGACGT CGAGCTGCCG CCCGGCTGGT CGTTGATGAT CTACACCGAC
GGCCTCGTGG AGGGCCGGGT GGGCAACGAC TCGGAGCGGC TCGGCTCGGA GCGGCTGATC
GAGCTGATCG GGCAGGTCCG CGCGGGGGCG CGGGGCGGGA CGATCGACCC CGACGAGCTC
CTGGACTCGC TGATCTCGCG GGTTAAGGAG CTGAACGGCG GGGAACTGGA CGACGACATG
GCCGTGCTGT TGATATCGGA GCAGAGCTGA
 
Protein sequence
MSAVDRISVL LVEDDEGDAI LVEALLEEVG ADVELLRART LREAMTQLSG ADCVLLDLGL 
PDTTGLDGLL NLLAQSAPAA IIVLTGLNDE HQGMRAVAAG AEDYLVKGQV DGAALLRGIR
YAVGRKQAEE TQRQLRDEKL HAAEKTRLER GLLPSPLLRG PAPLVKERYR PGGSRMLLGG
DFYDTVQAHD GTLHVIIGDV CGHGPDEAAL GVLLRIAWRA LLLAEQTPER VLHTMHELLE
LERHQPGLFT TACMISVAPD RRSARVFLAG HPEPILMADD KIVELPRTRA GLPLGVLPDS
EWDALDVELP PGWSLMIYTD GLVEGRVGND SERLGSERLI ELIGQVRAGA RGGTIDPDEL
LDSLISRVKE LNGGELDDDM AVLLISEQS