Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5003 |
Symbol | |
ID | 8329201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5961381 |
End bp | 5962493 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644945440 |
Product | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit |
Protein accession | YP_003102672 |
Protein GI | 256379012 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.25658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACAG CCACACCGGA CCGGACCCTG CTCCCCACCG AGGAACCGCT GGCGCTGCTG CGTCCCGACG GGTCCGCGGT CGAGGGCTCA CCGCTTCGGA TGCCCGACGA CGAGGTGCTG CTGGAGCTGC ACCGCCGCAT GGTCGTCGGC CGCCGCTTCG ACACCCAGGC CACCGCGCTC ACCCGCCAGG GCCGCCTCGC CGTCTACCCG TCCTCGCGCG GCCAGGAGGC GTGCCAGGTC GGCGCGGTCC TGGCGATGCG CGAGCGCGAC TGGCTGTTCC CCACCTACCG CGACAGCGTC GCCCTGGTCA CCAGGGGTGT GCCCGCCGCG GGCGCGCTGA CCCTGCTGCG CGGCGACTGG CACCTCGGCT ACGACCCGCG CGAGCACCGC GTCGGACCGC AGTGCACGCC GCTGGCGACC AACACCCCGC ACGCCGTCGG CTTCGCGCAC GCCGCCCGCT ACAAGGGCGA GGACACCGCC GCGCTGGTGC TGCTCGGCGA CGGCGCGACC AGCGAGGGCG ACACGCACGA GGCGCTGAAC TTCGCCGGGG TGTGGAAGGC GCCGGTGGTG TTCCTGGTGC AGAACAACGG CTACGCGATC AGCGTGCCGC TGAGCAAGCA GACCGCCGCG CCCACGTTGG CGCACAAGGG GATCGGGTAC GGCATCCGGT CGGTCCTGGT GGACGGCAAC GACGCGGCGG CGGTCCACGC GGTGGTGTCG GAGGCGCTGG CGTCCGGTGA GCCGGTGCTC GTGGAAGCGC TTACCTACCG CATCGAGGCG CACACCAACG CCGACGACGC GTCCCGCTAC CGGGACTCCG CCGAGGTCGC GCACTGGCTG GCCCGCGACC CCGTCGACCG GCTCGCCTCG CACCTGGCCT CGCGCGGGCT GCTCGACCCG GCGCGCCGAG ACTCGGTGGA CGCCGAGGCG GAGGAGTTCG CGGCGGCGCT GCGGGCCGAG CTGAACGCGG ACGCGCGCGT GGACCCGGCG GACCTGTTCC GGCACGTGTA CGCCGAGCCG ACCGCGCAGC TGCGCGAGCA GGCCGCGATG CTGGCGCGCG AACTGGACGC CGAGCACTCG GGCGCCGACG ACCTGGACGG GGGACGGGCA TGA
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Protein sequence | MATATPDRTL LPTEEPLALL RPDGSAVEGS PLRMPDDEVL LELHRRMVVG RRFDTQATAL TRQGRLAVYP SSRGQEACQV GAVLAMRERD WLFPTYRDSV ALVTRGVPAA GALTLLRGDW HLGYDPREHR VGPQCTPLAT NTPHAVGFAH AARYKGEDTA ALVLLGDGAT SEGDTHEALN FAGVWKAPVV FLVQNNGYAI SVPLSKQTAA PTLAHKGIGY GIRSVLVDGN DAAAVHAVVS EALASGEPVL VEALTYRIEA HTNADDASRY RDSAEVAHWL ARDPVDRLAS HLASRGLLDP ARRDSVDAEA EEFAAALRAE LNADARVDPA DLFRHVYAEP TAQLREQAAM LARELDAEHS GADDLDGGRA
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