| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5002 |
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| Symbol | |
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| ID | 8329200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5960329 |
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| End bp | 5961306 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945439 |
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| Product | Transketolase central region |
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| Protein accession | YP_003102671 |
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| Protein GI | 256379011 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00992852 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCCG CGCTCAACCG GGCGCTGGCC GACGCGCTGT CCGCCGACGA GCGCGTGCTG
GTGTTCGGCG AGGACGTCGG GCCGCTGGGC GGGGTGTTCC GGGTGACCGA CGGGCTGGCC
GAGCGGTTCG GCGAGCGCCG CGTGTTCGAC ACCCCGCTCG CCGAGGCGGG CATCCTCGGC
ACCGCCATCG GCATGGCCAT GAACGGGCTG CGGCCGGTGG TGGAGATGCA GTTCGACGCG
TTCGCCTACC CGGCGTTCGA GCAGATCACC AGCCACCTGG CCAAGTTGCG CAACCGCACG
GCGGGCGCGC TGTCGCTGCC CGTGGTGGTG CGCATCCCGT ACGGCGGCGG CATCGGCGGC
GTCGAGCACC ACTGCGACTC GTCCGAGGCG TACTACACGC ACACGCCGGG GCTGCGCGTG
GTCACGCCGG GCACGCCCGA CGACGCGTAC CGGCTGCTGC GCGACGCGAT CGACAGCCCG
GACCCGGTGG TGTTCCTGGA GCCCAAGCGC CGCTACTGGT CCAAGGGCGG GCTGGCGGCG
GGCGGACCGG CGTTCGACCG GGCGCTCGTG CGGCGGCCCG GCCGGGACGT GACCCTGATC
GCGTACGGTC CGATGGTGCT GACCGCGCTG GAGACCGCCG AGGCCGCCCG CGCCGAGGGC
TGGGACGTGG AGGTCGTCGA CCTGCGCACG CTGGCGCCGT TCGACGACGA GACGGTGTGC
GCGTCGGTGC GCCGCACCGG GCGGGCCGTG GTGGTGCACG AGGCGTCCGG GTTCGGCGGG
TACGGCGCGG AGGTCGTGGC GCGGGTGACC GAGCGGTGCT TCCACCACCT GCACGCGCCG
GTGCTGCGGG TGACCGGCTT CGACATCCCG TACCCGCCGC CGATGCTGGA GGAGCACCAC
CTGCCCGGCG TGGACCGCAT CCTGGACACC ATCGGCGCGC TGCAGTGGGA CGACCGGGTG
GAGGTGCGCG GTGCCTGA
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| Protein sequence | MAAALNRALA DALSADERVL VFGEDVGPLG GVFRVTDGLA ERFGERRVFD TPLAEAGILG
TAIGMAMNGL RPVVEMQFDA FAYPAFEQIT SHLAKLRNRT AGALSLPVVV RIPYGGGIGG
VEHHCDSSEA YYTHTPGLRV VTPGTPDDAY RLLRDAIDSP DPVVFLEPKR RYWSKGGLAA
GGPAFDRALV RRPGRDVTLI AYGPMVLTAL ETAEAARAEG WDVEVVDLRT LAPFDDETVC
ASVRRTGRAV VVHEASGFGG YGAEVVARVT ERCFHHLHAP VLRVTGFDIP YPPPMLEEHH
LPGVDRILDT IGALQWDDRV EVRGA
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