| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5001 |
|---|
| Symbol | |
|---|
| ID | 8329199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5959005 |
|---|
| End bp | 5960336 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644945438 |
|---|
| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
|---|
| Protein accession | YP_003102670 |
|---|
| Protein GI | 256379010 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0329277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGACT TCCGGCTGCC GGACCTGGGC GAGGGGCTCA CGGACGGGGA GATCGTGTCC
TGGCTGGTCG CGGTCGGCGA CCCGGTCGTG GTGGACCAGC CCGTGGTGGA GGTGGAGACC
GCCAAGGCCG TGGTGGAGGT GCCCTGCCCG TACGGGGGCG TGGTGACCGC GCGGCACGGC
GAGCCGGGGC AGCGGTTGGC GGTGGGGTCG GTGCTGCTGA GCGTCGCCGG TGACGGGGCG
GGAGGCGCCG CGGCGCGAGG GGAACCGGTC GCGGCGGAGG CCGCAGCCGC GGAACCCGGT
GCGGCGCAGG GCGATTCGGC GCAGGCTCAT TCGGCGCAGG CTGATTCGGC GGAGTACAGC
GGGAACGTGC TCGTCGGTTA CGGGACCTCG CAGCAGAACC GCCGTCGTCG CCGCGTGGCG
CACGCTCCCG TCGCGGATGA GCCCGCTGCC GCGGCCGGAC CGGCCAAGCT CGCGCCCGCC
GTGATCTCCC CGCTGGTGCG GAGGTTGGCC CGTGACAGCG GTGTGGCGCT GGAGACCGTC
GAGGGCAGCG GTCCCGGCGG GGTGATCCGC CGCGCCGACG TGGAGCGGGA GATCGCCGCC
CGCGCGCCCC GCCCGGCCCG CGCGCCCGGC CCGTGGACCG AGCCCGCAGC CGCGTCCCCA
GGGCAGGGCA AGCGCATTCC GCTGACCGGG GTCCGGGGTG TCGCGGCGCG CAAGTTCGCC
ACCTCCCGCA GGGAGATCCC CGAGGCGACG GTGTGGGTCG ACGTGGACGC CACCGGGCTC
GTGGAGGCGC GCGCCGCGCT GCCTGCGGTG TCGCTGCTGG GCCTGCTGGC CAGGTTCACC
GCGCTCGGCC TGCGCCGCTT CCCCGAGCTG AACTCGCGCG TCGAGGGCGA CGAGGTCGTG
CTGCTGGACG AGGTGAACCT CGGCTTCGCC GCGCAGACCG ACCGTGGCCT GGTGGTCCCG
GTGGTGCGGG GCGCGCACGC GCTGACCGCG ACCGAGCTGA CCGGGCGGCT GCGCGACCTG
ACCGCGTCCG CCCGCGACGG CGAGCTGACG GCGGCCGACC TGACCGGCGG GACGTTCACC
CTCAACAACT ACGGCGTGTT CGGCGTGGAC GGCTCGGCCG CGATCATCAA CCACCCGGAG
GTCGCGATCC TGGGCATCGG CCGCATCGCC GACCGCCCGT GGGCGCACGA GGGGCAGCTG
GCGCTGCGCA AGGTGGCCCA GCTGACGCTC AGCTTCGACC ACCGGGTGTG CGACGGCGGG
GTGGCGGGCG GGTTCCTGCG GTACGTAGCG GACCTGGTCG AGAACCCGGT GGCGCTGCTC
GCCGACGTCT AA
|
|---|
| Protein sequence | MPDFRLPDLG EGLTDGEIVS WLVAVGDPVV VDQPVVEVET AKAVVEVPCP YGGVVTARHG
EPGQRLAVGS VLLSVAGDGA GGAAARGEPV AAEAAAAEPG AAQGDSAQAH SAQADSAEYS
GNVLVGYGTS QQNRRRRRVA HAPVADEPAA AAGPAKLAPA VISPLVRRLA RDSGVALETV
EGSGPGGVIR RADVEREIAA RAPRPARAPG PWTEPAAASP GQGKRIPLTG VRGVAARKFA
TSRREIPEAT VWVDVDATGL VEARAALPAV SLLGLLARFT ALGLRRFPEL NSRVEGDEVV
LLDEVNLGFA AQTDRGLVVP VVRGAHALTA TELTGRLRDL TASARDGELT AADLTGGTFT
LNNYGVFGVD GSAAIINHPE VAILGIGRIA DRPWAHEGQL ALRKVAQLTL SFDHRVCDGG
VAGGFLRYVA DLVENPVALL ADV
|
|---|
| |