Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4882 |
Symbol | |
ID | 8329080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5821126 |
End bp | 5822457 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644945322 |
Product | hypothetical protein |
Protein accession | YP_003102554 |
Protein GI | 256378894 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.76417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGAACA CAGGGGGCGG GCTGGAGCTC GCGCAGGACG AGGTCGTGGC GCTCGCCAGC GAGCTGATCA GGATCGACAC CACCAACACC GGCGACCCGG ACACGCTGGT GCCCGAGCGG GCCGCGGCCG AGTGGGTCGC GGAGAAGCTG GCCGAGGTCG GGTACGAGAC CACCTACGTC GAGTCCGGCA ACACCGGCAA GGGGCGTGGC AACGTGATCG CGCGGTTGGC CGGGGCCGAC CCGTCGCGGG GCGCGCTGCT GGTGCACGGG CACCTGGACG TGGTGCCCGC CGACGCGTCG GAGTGGTCGG TGCACCCGTT CTCCGGCGCG GTGCAGGACG GGTACGTGTG GGGGCGGGGC GCGGTCGACA TGAAGGACAT GGTCGCCATG TCCCTCGCGG TGGCCCGCCG GTTCAAGCGG GACGGGATCG TGCCGCCCAG GGACATCGTG TTCGCGTTCC TCGCCGACGA GGAGGCGGGC GGGCTGCAGG GCGCGCACTG GCTGATCGAC CACCGGCCCG AGCTGTTCGA GGGCGTCACC GAGGCCATCA GCGAGGTCGG CGGGTTCTCG ATCACGCTCA AGGACGACGT GCGCGCCTAC CTCGTGGAGA CCGCAGAGAA GGGCATCCGC TGGCTGAAGC TGCGCGTGCG CGGCACGGCG GGCCACGGGT CGATGATCCA CCACGACAAC GCGGTCGCGA AGCTGGCCGC CGCCGTGACC AGGCTGGGGC AGCACCGGTT CCCGCTGGTG ATCTCGCCGT CGGTGCGGGA GTTCCTCGAC GGGGTCACCG AGATCACCGG CATCGACTTC CCCGAGGACG ACATCGAGGG CGCCGTCGGC AAGCTCGGCG CGCTGTCGCG GATGATCGGC GCGACGCTGC GCGACACGGC CAACCCGACG ATGCTGACCG CGGGCTACAA GGCGAACGTG ATCCCGTCCG TGGCCGAGGC CACCGTGGAC TGCCGCATCC TGCCCGGCCG CGAGGAGGCG TTCGACGCGG AGCTGGCGGA GCTGCTCGGC CCGGACGTGG AGCGCGAGTG GATCGGCCTG CCGCCGGTGG AGACCACGTT CGACGGGGCG CTGGTGGACG CGATGGTCGG CTCGATCAGC GCGGAGGACC CCGGCGCGAA GGTGCTGCCG TACATGCTGT CGGGCGGCAC GGACGCGAAG GCGTTCCAGC GCCTGGGCAT CCGCAACTTC GGCTTCGCGC CGCTGAAGCT GCCCGCCGAC CTGGACTTCT CCGGGCTGTT CCACGGGGTG GACGAGCGGG TGCCGGTGGA CGCGCTGCGG TTCGGGGTGC GGGTGCTGGA CAGGTTCCTG CTGAACTCGT GA
|
Protein sequence | MTNTGGGLEL AQDEVVALAS ELIRIDTTNT GDPDTLVPER AAAEWVAEKL AEVGYETTYV ESGNTGKGRG NVIARLAGAD PSRGALLVHG HLDVVPADAS EWSVHPFSGA VQDGYVWGRG AVDMKDMVAM SLAVARRFKR DGIVPPRDIV FAFLADEEAG GLQGAHWLID HRPELFEGVT EAISEVGGFS ITLKDDVRAY LVETAEKGIR WLKLRVRGTA GHGSMIHHDN AVAKLAAAVT RLGQHRFPLV ISPSVREFLD GVTEITGIDF PEDDIEGAVG KLGALSRMIG ATLRDTANPT MLTAGYKANV IPSVAEATVD CRILPGREEA FDAELAELLG PDVEREWIGL PPVETTFDGA LVDAMVGSIS AEDPGAKVLP YMLSGGTDAK AFQRLGIRNF GFAPLKLPAD LDFSGLFHGV DERVPVDALR FGVRVLDRFL LNS
|
| |