Gene Amir_4824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4824 
Symbol 
ID8329022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5742911 
End bp5743837 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content73% 
IMG OID644945265 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003102497 
Protein GI256378837 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00015803 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGCCGA ACAAGAATGG AGGTGTGCTG AACCCGTGGC GGCTGCGGCT GCTGAGCCAG 
CTGGAGACCC TGGGGACCGT GCGCGCGGTC GCTGAGGCTG CTTCGCTGAG CGCGTCGACC
GTGTCCCAGC AGCTGTCGGT GCTGGAGGCC GAGACGCGCA CCCGGTTGCT GGAGCGGACC
GGGCGGCGGG TGCGGTTGAC GTCGGCCGGG CAGCTGCTGG CGCGGCGGGC GCGGGAGATC
CTCGACCACA TGGACACCGT GGAGGCCGAG CTGCTCGGGC TCGGTGGGGA ACCCGCCGGG
CTCGTGCGGG TGGGCACGTT CCAGAGCGGG ATCCACACCC TCGCGGTGCC CGCTGTGCTC
CAGCTGGCGC GCTCGCACCC GCACCTCCAG GTCGAGCTGC TGGAGCTGGA GCCGCACGAG
AGCCTGCGCG CGCTGCGGGT GGGGGACGCT GATCTGGTCA TCACGACGGC GGACTTCGTC
GAGGTCCCGC TCGGGCCTGA TCTGGACGTG GTGCCGCTGG CGGTCGATCC GGTGGTGCTC
GTCCTGCCGC AGCACCGGGG TGCGCGGGGG CCGGTGGATC TCGCGGCGTT CGCGGATGAG
CCGTGGGCGC TGGACGTGCC GGGGTCCTAC ATGGCGAACC TGACGACGCG GTTGTGCCGT
CAGGCCGGGT TCGAGCCTCG GGTGGTGTGC CGGTTCAGCA ACTACCTGAT GACGCTCCAG
CACGTCGAGG CCGGGTTGTC GGTGGCGCTG CTGCCCGCGC TGGCGGTGGA CGAGCGGTAC
CGGCTGGTTC GGCGTGAGCT GGTGCCGGAG GTGACGCGCA CGATCACCGC GGTGGTGCGC
AGGGGTGCTC GGCGGCCGGC CGGGGTCGAG CTGGTGCTGG AGACCTTGCG CCGGTTGCCC
ACGCCGCCGG GGATTTCCCG GCCGTAG
 
Protein sequence
MWPNKNGGVL NPWRLRLLSQ LETLGTVRAV AEAASLSAST VSQQLSVLEA ETRTRLLERT 
GRRVRLTSAG QLLARRAREI LDHMDTVEAE LLGLGGEPAG LVRVGTFQSG IHTLAVPAVL
QLARSHPHLQ VELLELEPHE SLRALRVGDA DLVITTADFV EVPLGPDLDV VPLAVDPVVL
VLPQHRGARG PVDLAAFADE PWALDVPGSY MANLTTRLCR QAGFEPRVVC RFSNYLMTLQ
HVEAGLSVAL LPALAVDERY RLVRRELVPE VTRTITAVVR RGARRPAGVE LVLETLRRLP
TPPGISRP