Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4824 |
Symbol | |
ID | 8329022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5742911 |
End bp | 5743837 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644945265 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003102497 |
Protein GI | 256378837 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00015803 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGGCCGA ACAAGAATGG AGGTGTGCTG AACCCGTGGC GGCTGCGGCT GCTGAGCCAG CTGGAGACCC TGGGGACCGT GCGCGCGGTC GCTGAGGCTG CTTCGCTGAG CGCGTCGACC GTGTCCCAGC AGCTGTCGGT GCTGGAGGCC GAGACGCGCA CCCGGTTGCT GGAGCGGACC GGGCGGCGGG TGCGGTTGAC GTCGGCCGGG CAGCTGCTGG CGCGGCGGGC GCGGGAGATC CTCGACCACA TGGACACCGT GGAGGCCGAG CTGCTCGGGC TCGGTGGGGA ACCCGCCGGG CTCGTGCGGG TGGGCACGTT CCAGAGCGGG ATCCACACCC TCGCGGTGCC CGCTGTGCTC CAGCTGGCGC GCTCGCACCC GCACCTCCAG GTCGAGCTGC TGGAGCTGGA GCCGCACGAG AGCCTGCGCG CGCTGCGGGT GGGGGACGCT GATCTGGTCA TCACGACGGC GGACTTCGTC GAGGTCCCGC TCGGGCCTGA TCTGGACGTG GTGCCGCTGG CGGTCGATCC GGTGGTGCTC GTCCTGCCGC AGCACCGGGG TGCGCGGGGG CCGGTGGATC TCGCGGCGTT CGCGGATGAG CCGTGGGCGC TGGACGTGCC GGGGTCCTAC ATGGCGAACC TGACGACGCG GTTGTGCCGT CAGGCCGGGT TCGAGCCTCG GGTGGTGTGC CGGTTCAGCA ACTACCTGAT GACGCTCCAG CACGTCGAGG CCGGGTTGTC GGTGGCGCTG CTGCCCGCGC TGGCGGTGGA CGAGCGGTAC CGGCTGGTTC GGCGTGAGCT GGTGCCGGAG GTGACGCGCA CGATCACCGC GGTGGTGCGC AGGGGTGCTC GGCGGCCGGC CGGGGTCGAG CTGGTGCTGG AGACCTTGCG CCGGTTGCCC ACGCCGCCGG GGATTTCCCG GCCGTAG
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Protein sequence | MWPNKNGGVL NPWRLRLLSQ LETLGTVRAV AEAASLSAST VSQQLSVLEA ETRTRLLERT GRRVRLTSAG QLLARRAREI LDHMDTVEAE LLGLGGEPAG LVRVGTFQSG IHTLAVPAVL QLARSHPHLQ VELLELEPHE SLRALRVGDA DLVITTADFV EVPLGPDLDV VPLAVDPVVL VLPQHRGARG PVDLAAFADE PWALDVPGSY MANLTTRLCR QAGFEPRVVC RFSNYLMTLQ HVEAGLSVAL LPALAVDERY RLVRRELVPE VTRTITAVVR RGARRPAGVE LVLETLRRLP TPPGISRP
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