| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4821 |
|---|
| Symbol | |
|---|
| ID | 8329019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5740013 |
|---|
| End bp | 5741146 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644945262 |
|---|
| Product | glycerate kinase |
|---|
| Protein accession | YP_003102494 |
|---|
| Protein GI | 256378834 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1929] Glycerate kinase |
|---|
| TIGRFAM ID | [TIGR00045] glycerate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000302317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACCCGC AGCGCAACCA CGTGGTCGTG GCACTGGACT CCTTCAAGGG CTCGCTGACC
GCCCGCGCGG CCACGGCAGC ACTCGCACGG GGCCTGCGCC GCACGGGCGC GCACGTGGTC
GAGCACCCGG TGGCGGACGG CGGCGAAGGA ACCCTGGACG CCCTCCTGGG CGCAGGTTTC
ACCGAGGTCC CCACGCCGTC GACAGACGCA CTGGGCCGCC CTCTGACCAC CCGCTACGCC
ACCCGCTCAA GCACCGCCGC GATAGAATTG GCCGAGTCCT CAGGTCTGGC CGGAATAGCG
GACGTGCCAC TAACCCCAGC CCGCGCCCGA GCAGCAACAA CCCTGGGCGC CGGCCGCCTG
ATCGCGGCAG CCTTGAACGC GGGCCACCGC AGAATCGTCG TGGGCCTGGG CGGCAGCGCC
ACCACGGACG GCGGCGCAGG AATGCTGATC GCCCTGGGCG CACGCCTCCT GGACCGCCAC
GGCACCCCCC TGGACGGCAC CACTTCCCCC CTGCACGAGG TCCACTCCCT GGACCTCTCC
ACCCTGCACC CCGCCCTGCG CGACGCGGAC GTCGAAGTCG CCTGCGACGT GGACAACCCC
CTACTGGGCC CACAAGGCGC AGCAGCGATC TACGGCCCCC AAAAAGGCGC GGACCCCGCC
CTCGTAACCG AGCTCAACAC CTCCCTGACC CGCTGGGCAG ACCTCCTGGA GCAGGCAACA
ACCCGCTCCG CGCGCGACCT ACCCGGAGCA GGCGCGGCAG GCGGAACAGG TTTCGCGCTC
CTGGCGTGCG GTGCACGGAT GCGCTCAGGC ATCACCCTGG TCCTGGACCT GACCAACCTG
CCCACCGCGC TGCAAGGCGC CCGTCTGGTG ATCGCAGGCG AAGGCCGGGT CGACCACCAA
ACCCTGCACG GCAAAGCCCC CGCAGGCGTA GCGGCAGCAG CCCGAGCAGC AGGCGCACCA
GTGGTAGCGG TAGCCGGAAG CTGCACCCTG ACCCCCACCG AGCTGACCAG AGCAGGCTTC
ACCACAGCCT TCACCCTGAC CGACCTGGAA CCCGACCTCT CCCGCTGCCA CACCGAAGCC
GCCCCCCTGC TGGAACGCCT GGGCGAACAC ATCGCCAAGA CCTTCCCCCT CTAA
|
|---|
| Protein sequence | MDPQRNHVVV ALDSFKGSLT ARAATAALAR GLRRTGAHVV EHPVADGGEG TLDALLGAGF
TEVPTPSTDA LGRPLTTRYA TRSSTAAIEL AESSGLAGIA DVPLTPARAR AATTLGAGRL
IAAALNAGHR RIVVGLGGSA TTDGGAGMLI ALGARLLDRH GTPLDGTTSP LHEVHSLDLS
TLHPALRDAD VEVACDVDNP LLGPQGAAAI YGPQKGADPA LVTELNTSLT RWADLLEQAT
TRSARDLPGA GAAGGTGFAL LACGARMRSG ITLVLDLTNL PTALQGARLV IAGEGRVDHQ
TLHGKAPAGV AAAARAAGAP VVAVAGSCTL TPTELTRAGF TTAFTLTDLE PDLSRCHTEA
APLLERLGEH IAKTFPL
|
|---|
| |