Gene Amir_4809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4809 
Symbol 
ID8329007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5725666 
End bp5726325 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content75% 
IMG OID644945250 
Productrestriction endonuclease 
Protein accessionYP_003102482 
Protein GI256378822 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGCA ACAAGCGGAA GCGGGCGCGT GGCGGCAAGG GGAAGAAGAA GGGCACGGCG 
CGGAACTGGC TCCTGGCGGC CATCGCGGTC GTCGTGTTCC TCGTCGTGCG GTTCGTGCAG
GAGAACCCCG TGCTGTCGGC GTGGATCGGG GCGCTGCTGC TCGCGCTCCT GATCACCGCG
GGCGTGGTGG CGCTGAAGGT GCGGCGGGCC AGGAGGCGGG AGCAGGCCGA GCGGGACCGG
CTCATCGAGT TCACCGACGG CATGGGCGGC GTCGAGTTCG AGCAGTGGAC CGCGCGGCTG
CTGGAGCGGT CCGGGTTCCT GGACGTGGAG GTCGTCGGCG GGGCCGGGGA CGCGGGCGCG
GACGTGCTCG CGGAGGCCCC GGACGGCGGG CTGCTCGTGG TGCAGTGCAA GCGGTACGGG
CCCGGCAACA AGGTCGGGTC CGAAGCGGTG CAGCGCTTCG CGGGCACCGC GCGGGCCTAC
CACGGGGCCG ACTACGCCGT GCTGGTCACC ACGTCCACGT TCACCGCGCC CGCCCGCGAC
GTCGCCGGGC GCGTCGGCAT CGTGCTGGTC GACCGGGTCG CGCTGGCCGA GTGGGCGCGC
ACCGCGATCG CCCCCGACGA GCTGACGGCC GTGCCCAGCG AGGAGCCGCT GGCGGGCTGA
 
Protein sequence
MAGNKRKRAR GGKGKKKGTA RNWLLAAIAV VVFLVVRFVQ ENPVLSAWIG ALLLALLITA 
GVVALKVRRA RRREQAERDR LIEFTDGMGG VEFEQWTARL LERSGFLDVE VVGGAGDAGA
DVLAEAPDGG LLVVQCKRYG PGNKVGSEAV QRFAGTARAY HGADYAVLVT TSTFTAPARD
VAGRVGIVLV DRVALAEWAR TAIAPDELTA VPSEEPLAG