Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4770 |
Symbol | |
ID | 8328968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5683143 |
End bp | 5683895 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644945212 |
Product | ABC transporter related |
Protein accession | YP_003102444 |
Protein GI | 256378784 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.285332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGTGACC CGGTGATCCG CGTGGTGGGC GCCAGCGTGC GCCTCGGCGG TCGGGAAGTG CTGTCGGACG TGGACTTCGA GCTGCGCGGC GGTGAGCTGG TCGGGCTGAT CGGGCCCAAC GGGGCCGGGA AGACCACGCT GCTGCGCACC GTCCTCGGCC TGCTGCCGCT GGAGAGCGGG AGCGTGGAGG TGCACGGGCG CAGCGCGCGG CGCGCCCAGG GGTCGGTGGG GTACGTGCCG CAGCGGCACG AGTTCGCCTG GGACTTCCCC ATCACCGTCG CGGGCGCGGT CGCCACCGGG CGCACGCACC TGCGCGGGCT GCTGCGCCGC CGGAGCGCGG ACGACCTGGC CGCGGTGGGG CAGGCGCTGG AGCGGGTCGG CATGAGCGAC CTGGCGGGCA GGCCGGTCGG CGAGCTGTCC GGCGGGCAGC GGCAGCGGGT GCTGGTGGCG CGGGCGCTCG CGCTGCGGCC GGGGACGCTG CTGCTGGACG AGCCGTTCAC CGGCATCGAC GTGCCCACGC AGGAGTTGTT GAGCGGGCTG CTCGCGCAGC TCCGGGACGA GGGGGTGGCG GTGCTGATGA CCACGCACGA CCTGGCCGCC GCGACCGCGC TGTGCAGCCG GTTGTGCCTG CTGAACCGCA CCGTCGTCGC GGACGGCGAG CCGAAGGCGC TGGCGGACAC GGACATCTGG CTGCGCACGT TCGGCCTGGA CCGGGCCGAG CAGCTGCTGC GGTCGCTGGG GGTGGGGCGG TGA
|
Protein sequence | MGDPVIRVVG ASVRLGGREV LSDVDFELRG GELVGLIGPN GAGKTTLLRT VLGLLPLESG SVEVHGRSAR RAQGSVGYVP QRHEFAWDFP ITVAGAVATG RTHLRGLLRR RSADDLAAVG QALERVGMSD LAGRPVGELS GGQRQRVLVA RALALRPGTL LLDEPFTGID VPTQELLSGL LAQLRDEGVA VLMTTHDLAA ATALCSRLCL LNRTVVADGE PKALADTDIW LRTFGLDRAE QLLRSLGVGR
|
| |