Gene Amir_4728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4728 
Symbol 
ID8328926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5639694 
End bp5640359 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content74% 
IMG OID644945172 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_003102404 
Protein GI256378744 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGGACC TGGCCAGCGT CATCGACCAC ACCCTCCTCA AGCCCGAGGC CACCCGCGCC 
GACGTCGCCC GGTTCGTCCA GGAGGGCGTC GAGCTGGGCG CGTACTCCGT GTGCGTCTCG
CCGAACATGC TCCCCCTCGA CCTGCCCGAG GGCGCGTCGA TCAAGGTCGC CGCCGTCTGC
GGCTTCCCCT CCGGCAAGCA CGCCTCCGCG ATCAAGGCCC TGGAGGCCTC CCGCGCCGTC
GCGCAGGGCG CCGACGAGAT CGACATGGTC ATCGACGTCG GCGCCGCGGT CGAGGGCCGC
TTCGCCGACG TGGAGGCCGA CGTCCGCGCC GTCCGCGAGG CCGTGCCCGG CGCGGTCCTG
AAGGTCATCA TCGAGTCCGC CGCGCTCACC GACGAGCAGA TCGTCGCCGT CTGCGAGGCC
GCCGTGCGCG CGGAGGCCGA CTTCGTCAAG ACCTCCACCG GCTTCCACCC CACCGGCGGC
GCCACCGCGC ACGCCGTCGC GCTGATGGCC AGGACCGTCG GCCCGAACGT GGGCGTCAAG
GCCTCCGGCG GCATCCGCAC CGCCGAGGCC GCGCGCGAGA TGATCGCCGC GGGCGCCACC
CGCCTGGGCG TCTCGGGCAC CCGCGCGCTC GTCGAGGGCG CGGACACGAA CCCGTCCGGT
TACTGA
 
Protein sequence
MPDLASVIDH TLLKPEATRA DVARFVQEGV ELGAYSVCVS PNMLPLDLPE GASIKVAAVC 
GFPSGKHASA IKALEASRAV AQGADEIDMV IDVGAAVEGR FADVEADVRA VREAVPGAVL
KVIIESAALT DEQIVAVCEA AVRAEADFVK TSTGFHPTGG ATAHAVALMA RTVGPNVGVK
ASGGIRTAEA AREMIAAGAT RLGVSGTRAL VEGADTNPSG Y