Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4728 |
Symbol | |
ID | 8328926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5639694 |
End bp | 5640359 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644945172 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_003102404 |
Protein GI | 256378744 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGGACC TGGCCAGCGT CATCGACCAC ACCCTCCTCA AGCCCGAGGC CACCCGCGCC GACGTCGCCC GGTTCGTCCA GGAGGGCGTC GAGCTGGGCG CGTACTCCGT GTGCGTCTCG CCGAACATGC TCCCCCTCGA CCTGCCCGAG GGCGCGTCGA TCAAGGTCGC CGCCGTCTGC GGCTTCCCCT CCGGCAAGCA CGCCTCCGCG ATCAAGGCCC TGGAGGCCTC CCGCGCCGTC GCGCAGGGCG CCGACGAGAT CGACATGGTC ATCGACGTCG GCGCCGCGGT CGAGGGCCGC TTCGCCGACG TGGAGGCCGA CGTCCGCGCC GTCCGCGAGG CCGTGCCCGG CGCGGTCCTG AAGGTCATCA TCGAGTCCGC CGCGCTCACC GACGAGCAGA TCGTCGCCGT CTGCGAGGCC GCCGTGCGCG CGGAGGCCGA CTTCGTCAAG ACCTCCACCG GCTTCCACCC CACCGGCGGC GCCACCGCGC ACGCCGTCGC GCTGATGGCC AGGACCGTCG GCCCGAACGT GGGCGTCAAG GCCTCCGGCG GCATCCGCAC CGCCGAGGCC GCGCGCGAGA TGATCGCCGC GGGCGCCACC CGCCTGGGCG TCTCGGGCAC CCGCGCGCTC GTCGAGGGCG CGGACACGAA CCCGTCCGGT TACTGA
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Protein sequence | MPDLASVIDH TLLKPEATRA DVARFVQEGV ELGAYSVCVS PNMLPLDLPE GASIKVAAVC GFPSGKHASA IKALEASRAV AQGADEIDMV IDVGAAVEGR FADVEADVRA VREAVPGAVL KVIIESAALT DEQIVAVCEA AVRAEADFVK TSTGFHPTGG ATAHAVALMA RTVGPNVGVK ASGGIRTAEA AREMIAAGAT RLGVSGTRAL VEGADTNPSG Y
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