| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4714 |
|---|
| Symbol | |
|---|
| ID | 8328912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5623794 |
|---|
| End bp | 5625113 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644945158 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003102390 |
|---|
| Protein GI | 256378730 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCTG CCGACCCGCC CCCCTCCCAG TCGAACGCCG TCGAGTACCC CGTGCCCGGC
GCGTGGGTGC GCGAGTTCAC CGTCGACGCC CCGCTGGACT GGCACGCCCC GGACGAGCGG
ACCGTGGAGC TGTTCGTCCG CGAGTTCACC GACCCGGACC GCAGGCGCGA GGACCTGCCG
CTGCTGACCT ACCTGCAGGG CGGTCCCGGC GGCGCGAACC CGCGCCCCGA GCGGGTCGAC
GGCTGGCTCG CCGAGGCGCT GCGCACCTAC CGCGTGGTCC TGGTCGACCA GCGCGGCACC
GGCCGCAGCA CCCCGGTCGA CGGCGCCGTG ATCTCCGGCT TCCCGGACGG CCGCGCCGCC
GCCGAGCACC TGCTCCACTT CCGCGCCGAC TCCATCGTGC GCGACCTGGA GCACGTACGG
AACCGGTGCT ACGGCGGGAG GAGGTGGGCC ACGCTCGGCC AGAGCTTCGG CGGCTGGATC
ACCCTGGCCT ACCTCTCGCA CGCCCCGCAG GCGCTCGCCG CGTGCTACGT GTGCGGCGGC
ATCCCCGGCA CGCCACCGGA CCCGGACGAG GTGTACCGGC GCACGTTCAC CCGCGCCGAG
GCCAAGACCG CCGACTTCTA CCGCCGCTAC CCGCAGGACG TCGCCGCGGT CGCCGCGATC
GCCGACCGGC TGGCCGGGGG CAGCGTCGAG CTGCCGGACG GCTCGCCGCT GTCCGTGCGC
CGCTTCCAGA CCCTGGGCGG CGACCTCGGC TTCAACACCG GGCACCAGCG CCTGCACTGG
CTGGTGTCCG AGGGGCTGCA CCGCGACGGC CGGTTCACCG GCAAGTTCCT GGAAGCGGTG
CTGACCAAGA CCTCCTACGC GGGCAACCCG CTGTTCTGGG TCCTGCAGGA GAGCATCTAC
GGCGACGGCG ACAACGGCCC GTTCCGCTGG TCCGCGCAGC GCGAGCGCGA CCTGCGCCCG
CAGTTCGCCG AGGACCGCAG GCCGCTGCTG CTCACCTCCG AGATGGCCTT CCCCTGGATG
TTCCAGGAGA TCCGCGCGCT GCGGCCGTTC GCCGCGGCCA TGGAGGAGCT GGCGAACGTG
CAGGTCTGGA CCGACCTGTA CGACCCGGAC CGCTTGGCGG CCAACGAGGT CCCGCTCGCG
GCGGTCGTCT ACCACGACGA CCTGTTCGTG GACGAGGGGC TCCAGCGCGA CACCCTGTCC
CGGCTCGGCA ACGCGCGGGC GTGGGTGACC AACGAGCACG AGCACGACGG CATCTCGGAC
GGCAAGGTGC TGCGCAGGTT GCGGGAGATC GTCCGCGACC TCGGGGGAGA ACAGCGATGA
|
|---|
| Protein sequence | MSPADPPPSQ SNAVEYPVPG AWVREFTVDA PLDWHAPDER TVELFVREFT DPDRRREDLP
LLTYLQGGPG GANPRPERVD GWLAEALRTY RVVLVDQRGT GRSTPVDGAV ISGFPDGRAA
AEHLLHFRAD SIVRDLEHVR NRCYGGRRWA TLGQSFGGWI TLAYLSHAPQ ALAACYVCGG
IPGTPPDPDE VYRRTFTRAE AKTADFYRRY PQDVAAVAAI ADRLAGGSVE LPDGSPLSVR
RFQTLGGDLG FNTGHQRLHW LVSEGLHRDG RFTGKFLEAV LTKTSYAGNP LFWVLQESIY
GDGDNGPFRW SAQRERDLRP QFAEDRRPLL LTSEMAFPWM FQEIRALRPF AAAMEELANV
QVWTDLYDPD RLAANEVPLA AVVYHDDLFV DEGLQRDTLS RLGNARAWVT NEHEHDGISD
GKVLRRLREI VRDLGGEQR
|
|---|
| |