Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4704 |
Symbol | |
ID | 8328902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5610713 |
End bp | 5612149 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644945148 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003102380 |
Protein GI | 256378720 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.391324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGCGA CCCCGAACAG CCCATCCTTA GACGGGCCCG TGCGCATGAC CGCGCGCGAC GCCGCACTGC TCTTCGTGCT GTGCGGCTCG ATCTTCCTCG AAGGCGTCGA CATCTCCATG CTCGGCGTCG CACTGCCCTC CATCAAGGAC GAGCTCGGCA TGTCGGCGGG CGAGCTCCAG TGGGTCGTCA GCGCCTACGT GCTGGCCTAC GGCGGGTTCA TGCTCCTGGG CGGCCGTGCC GCCGACCTGC TGGGCCGGCG CAAGATGTTC GTGCTGTGGC TGGCGGTCTT CGTCGTGTTC TCCGGTCTCG GCGGCCTGGC CACCGAGGGC TGGATGCTCA TCGTCTCCCG CGCCATCACC GGCCTCGCCG CCGCGTTCAT GACCCCCGCG GGCCTGTCGC TGATCACCAC GAGCTTCGCC GAGGGCCCCA AGCGCAACCG GGCGCTGCTC TGGTACGCGG GCACCGCCGC CGGTGGCTTC TCGCTGGGCC TGGTCGTCGG CGGCCTGCTG ACCGCCATCG GCTGGCGCTG GGTCTTCTTC GCCCCGGTCA TCCTCGCCGC GATCATCTTC GGCTTCGCGG TCAAGCTGAT CGAGCACGAC ACCCCGCCGC CGCGCGTCCC CGGCCAGAAG TACGACGTGT TCGGCGCCGC CACGATGACC CTCGGCGCGG TCGGCGCGGT CTACACCGTC GTCATGGCGC CCGAGGTGCC CGTCAGCCGG ACCGTGCTGA CCGCCGCGAT CAGCGCCGTG CTGCTGGTGG CGTTCGTGAT CGCGGAGAGG CGCTCGAAGG AGCCGCTGGT GCGCCTGGGC ATCTTCCGCA GCGCCAACCT GGTGCGCGCC AACATCGCCA CCGTGCTGTT CGCAGGCTCG TTCTTCGGCT TCCAGTTCAT CACCGTGCTC TACATGCAGG ACCTGCGCGG CTGGGGCGCG CTGGAGACCG GCATCGCGCT GCTGGTCATC GGCATCGACT CGGTGCTCGC GCCGACCCTC ACGCCCAAGC TGGTCGACCG GTTCGGCAAC CCCGTCGTGC TGTTCGCGGG CTTCGTGTCG CTGGCGCTGG CCTACTTCCT GTTCCTGGAC ATCCCGGCCG ACGCGAACTA CTGGACCGGC ATGTTCCCGA CGATGCTGCT CATCGGCATC GCCTTCACCC TGGTCTACGG GCCGCTGACG ATCGTCGCGG TGGAGGGCAT CGCCGACGAG GAGCAGGGCC TGGCGGGCGG CATCTGGAAC ACCTCGTTCC AGTTCGGCGC GGCGCTCGGC CTCGCCGTGG CCGCCTCGCT GACCGCCACC TCGGGCACCG CCCTCGACGG CTACCACAAG GCGCTGCTCG TGCCGTTCGT CGCCACGCTC GTCGCGCTCG TCGTGGTGGC CACGGGCCTG CGCTCCCGCG CCTCCGCCGA GCCCGTCGCG GTGGAGGCCC AGCCCACCGC GGGCTGA
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Protein sequence | MSATPNSPSL DGPVRMTARD AALLFVLCGS IFLEGVDISM LGVALPSIKD ELGMSAGELQ WVVSAYVLAY GGFMLLGGRA ADLLGRRKMF VLWLAVFVVF SGLGGLATEG WMLIVSRAIT GLAAAFMTPA GLSLITTSFA EGPKRNRALL WYAGTAAGGF SLGLVVGGLL TAIGWRWVFF APVILAAIIF GFAVKLIEHD TPPPRVPGQK YDVFGAATMT LGAVGAVYTV VMAPEVPVSR TVLTAAISAV LLVAFVIAER RSKEPLVRLG IFRSANLVRA NIATVLFAGS FFGFQFITVL YMQDLRGWGA LETGIALLVI GIDSVLAPTL TPKLVDRFGN PVVLFAGFVS LALAYFLFLD IPADANYWTG MFPTMLLIGI AFTLVYGPLT IVAVEGIADE EQGLAGGIWN TSFQFGAALG LAVAASLTAT SGTALDGYHK ALLVPFVATL VALVVVATGL RSRASAEPVA VEAQPTAG
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