Gene Amir_4688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4688 
Symbol 
ID8328886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5575877 
End bp5577136 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content78% 
IMG OID644945132 
Producthistidine kinase 
Protein accessionYP_003102364 
Protein GI256378704 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGTGA TCGACCGCGC CGCCGCGCCC CGGCCCCCCT CGGGGCCGGG GCGCGGCCTG 
CTGCGCGCCC CCGTCGACGG GCTCCGGTCG CTGCTGGGCG CGCTGGGCAC GGCCGTGCCC
GCCTTCGTGG TCCTGGCGCT CGTGCCGGTG GTGGCGGCGC TGTGCCTGGT GGGGCTGGGC
ATCCCGCTGG TGCCGCGCGT CTCGCGGGCC GTGCGGGCGG TCGCGGACCG GGAGCGGGGG
CGGCTCTCAC GCGTGGGGGC CGTGGTCGCG GAGGCCGAGC CGCTGCCGGA CTGGGTGGTG
CCGTCCGTGC GGGCGACGGC GCGCGAGCTG GGGTGGTTGG CGTGGCACGG GACCTGCGGG
TTGGCGCTGG CGGCCTGCGG GGTGATGCTG CCGCTCAACG CGGTGCACGA CCTGGCGTTC
CCGCTGTACT GGGACGTGCT GCCGCCCGGT GAGATCACCG CGGCGATCGG CTTCCCGACG
GCGCGCGACG GTCGGGAGGC GCTGCTGGTG TCCGGGATCG GGCTCGGGTG GGCGGTGCTG
GCGCTGATCG CGCCGCCGGT GCTGGCCGGG GCGCACGTGG CGGTGGGGCG GGCGCTGCTC
GGTCCGGCGC CGGGCACGGA CCTGACGCTG CGGGTGATCC GGTTGACCGC CACGCGCGCG
GCGGCGCTGG ACGCGCACGC CGTGGAGCTG CGGCGGATCG AGCGGTCGCT GCACGACGGG
GCGCAGAACC ACCTGGTGGC GGTGAACCTG CTGGTGGGCG CGGCGAGGCG GGTGGTGCAC
CGCGATCCGG CGGCGGCCGA CGCGGTGCTC GACCGGGCGC AGGAGGCTGC TGAGCAAGCG
CTTTCCGAGC TGCGGGCGGT GGTGCGGGCG ATCCTGCCGC CGGTGCTGGA CGACCGGACG
CTGGGCGACG CGGTCGCGGC GCTGGCGGCG AACTGCCCGG TGCCCTGCGC GGTCGTGTCG
GACGTTCCGG TGCGCAGCGC GGCGTCCGTC GAGGCGACGG CGTACTTCGT GGTGGCGGAG
GCGTTGACGA ACATCGCCAG GCACAGCGGC GCGCGGCGGG CGGAGGTGCG GATCGAGCAG
CGGGAGGGGC GGTTGCGGGT GACGATCAGC GACGACGGGC GCGGCGGCGC GGACGCGCGG
GGCGGCTCGG GGTTGGACGG CATCCGGCGG CGGGTGGAGG CGCACGACGG GGTGCTGCTG
GTCAGCAGCC CGGTGGGCGG GCCGACGGCG GTGGGGGTGA GCCTGCCGTG CGGATCGTGA
 
Protein sequence
MRVIDRAAAP RPPSGPGRGL LRAPVDGLRS LLGALGTAVP AFVVLALVPV VAALCLVGLG 
IPLVPRVSRA VRAVADRERG RLSRVGAVVA EAEPLPDWVV PSVRATAREL GWLAWHGTCG
LALAACGVML PLNAVHDLAF PLYWDVLPPG EITAAIGFPT ARDGREALLV SGIGLGWAVL
ALIAPPVLAG AHVAVGRALL GPAPGTDLTL RVIRLTATRA AALDAHAVEL RRIERSLHDG
AQNHLVAVNL LVGAARRVVH RDPAAADAVL DRAQEAAEQA LSELRAVVRA ILPPVLDDRT
LGDAVAALAA NCPVPCAVVS DVPVRSAASV EATAYFVVAE ALTNIARHSG ARRAEVRIEQ
REGRLRVTIS DDGRGGADAR GGSGLDGIRR RVEAHDGVLL VSSPVGGPTA VGVSLPCGS