| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4655 |
|---|
| Symbol | |
|---|
| ID | 8328853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5542504 |
|---|
| End bp | 5544816 |
|---|
| Gene Length | 2313 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644945101 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003102333 |
|---|
| Protein GI | 256378673 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.134449 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTG GGTTCGCCGG GCACGCCGCC GCCCGCGTGG GCGCCCCCGC GGCCGGACCG
GCTCGGGGCG CGGACGCGGC CGTTCGGGTG TGGTCCGCCG AGAGCCGCGA CACGGAGGCC
AACCACATGA CCGGGACCGA GTCCGCGCCG CCCAGCACCA CCGCCCCACC CCGCGCGAGC
AGCGCGAACG CCCTGGAGAT CGCCGTCGTC GGCGTCGGCC CGCGCGGCCT GTCCGTGCTG
GAGCGCCTGT GCGCCAACGC GGGCGCCGAC TTCGCCCACC TGCGCGTCCG GGTCCGCCTG
GTCGACCCGC ACCTGGGCAG GGGCGGCCGG GTGTGGCGCA CCGACCAGTC GCCGCACCTG
CTGATGAACA CCATCGCCTC GCAGGTGACC CTGTTCGCGG ACGAGACCGT CGACTGCGCG
GGGCCGGTCG TGCCCGGACC GGATCTGCAC GAATGGGCGG GATTCGCCGC CCTCGCGGGC
GAGTTCGACG ACCTGCCGGA GGCGGTCCGC GCCGAGGCCC GCGCGCTCGG GCCCGACGAC
TACCCCACCA GGGCCTTCTA CGGGCACTAC CTGGACTGGG TGCTGCGGCA CCTGCTGCGC
ACCGCGCCGC CCAACGTCGC CATCGAGTTG CACCAGCGGG TCGCCGTCGA CCTGGACGAG
GACCCGGACG GCGTCCAGCA CCTGACCCTC GCGGGCGGCG AGCGGATCAC CGGCCTGGAC
GCGGTCGTGC TCACCACCGG CCACGCCGAC CTGCGCCCGA CCGGCGAGGA GCGCGCGCAC
GCCGAGTTCG CCCGCGCCCA CGGCCTGCGC TACCTGCCGC CGGACAACCC GGCCGAGACC
GACCACGGGG CCGTCGAACC CGGCGAGAAG GTGCTGGTCC GGGGGCTGGG CCTGAACTTC
TTCGACCACA TGGCGCTGCT CACCGCAGGG CGTGGCGGCC GGTTCGAGCG CCGAGCCGAC
GGCACCCTCG CCTACCACGC GTCCGGCCGC GAGCCGCTCC TGGTCGCGGG GGCCCGCAGG
GGCGTGCCGC ACCACGCGCG CGGCGAGAAC CAGAAGGGCC CGCGCGGCAG GCACGTGCCG
CTGTTCCTCA CCGAGGAGCG TATCGCCGCG CTGGCCGGGG CCGGTCGCCC GCTGCGGTTC
CTGGACGACG TGTGGCCGTG GATCGACGGC GAGGTCAGGG CGGTCTACTA CGCGGCGCTG
CTGGCCGAGC GCGACGGACC CGGCGCGGTG GCCGGGTTCC TCGCCGAGTA CCGGCCGCTC
GTGGAAACCG TGGGAGCGCT CTCGCACCTG GCCGCGGAGT CCCTGGACCT GGTGACCGCA
CGACCCGGAG CGGGGACGAA CCCCTCAGGC GCGACCGCGA ACCCGCTGGG TGCCGCAGCG
AATCCGCTCG GCCCGCCCGC GAACCCGCTC GGCCCGCCCG CGTATCCGCT GGGCCCGCCC
GCGATCCCGG TGACCCTGGC CGAGGCCGAG GGCGAGCTGC TCGACGCCTG GTCCGTGCCG
CGCGCCGACC GCTGGGACTG GGCCGCGCTC GCCGCCCCGC ACCGGGGTCG CGACTTCGCC
CACCCCGAGC AGTTCCGCGA CTGGCTGCTC GGCCACCTGC GCGCCGACGT GCGCGAGGCC
CGCCTCGGCA ACGTGCGCGG CCCCCTCAAA GCGGCCCTGG ACGTGCTGCG CGACCTGCGC
AACGAGGTCC GCCTGGTGGT CGACCACGGC AGCCTCAGCG GCGACTCGCA CGAGGCCGAG
CTCCAGCGCT GGTACACCCC GCTCAACGCC TACCTGTCCA TCGGCCCGCC GGTCGGCCGC
ATCGAGGAGA TGATCGCCCT GCTGGAGGCC GGGGTGCTGG AGGTGGTCGG CCCCGGCGTC
ACCGTCGAGC GCGACGAGCG GCGCGGCGAG TGGGTCATGG GCAGCCCGGC CGTCCCCGGC
TCCCGGCACC GCGCCGGCGT GCTGCTGGAG GCGAGGCTCC CGGAGAGCGA CGTGCGCCGC
ACCCTCGACC CGCTCGTGGA GTCCTTGCTG CGCAAGGGCT GCGGTGTCCC GTACCGCATC
CCGGTCGACG GCGGCGGGCA CCTGGAGACC GGCGGGCTGG CCGTCACCCG CCGCCCCTAC
CGGCTCGTCG AGCGCTCCGG CGCGGTCCAC CCGAGGCGGT TCGCCTTCGG CATCCCCACC
GAGTCCGTGC ACTGGGCGAC CGCGGCGGGT GTGCGCCCCG GCGTGAACTC CGTCATCCTC
GGCGACGCCG ACGCGGTGGC CAGGGCGAGC GTCCTGGCCG CCGACGCCCG CGCCGCCGAC
GCGGTCGGGA GGAAGGGGAA CCGTGTTCGC TGA
|
|---|
| Protein sequence | MNLGFAGHAA ARVGAPAAGP ARGADAAVRV WSAESRDTEA NHMTGTESAP PSTTAPPRAS
SANALEIAVV GVGPRGLSVL ERLCANAGAD FAHLRVRVRL VDPHLGRGGR VWRTDQSPHL
LMNTIASQVT LFADETVDCA GPVVPGPDLH EWAGFAALAG EFDDLPEAVR AEARALGPDD
YPTRAFYGHY LDWVLRHLLR TAPPNVAIEL HQRVAVDLDE DPDGVQHLTL AGGERITGLD
AVVLTTGHAD LRPTGEERAH AEFARAHGLR YLPPDNPAET DHGAVEPGEK VLVRGLGLNF
FDHMALLTAG RGGRFERRAD GTLAYHASGR EPLLVAGARR GVPHHARGEN QKGPRGRHVP
LFLTEERIAA LAGAGRPLRF LDDVWPWIDG EVRAVYYAAL LAERDGPGAV AGFLAEYRPL
VETVGALSHL AAESLDLVTA RPGAGTNPSG ATANPLGAAA NPLGPPANPL GPPAYPLGPP
AIPVTLAEAE GELLDAWSVP RADRWDWAAL AAPHRGRDFA HPEQFRDWLL GHLRADVREA
RLGNVRGPLK AALDVLRDLR NEVRLVVDHG SLSGDSHEAE LQRWYTPLNA YLSIGPPVGR
IEEMIALLEA GVLEVVGPGV TVERDERRGE WVMGSPAVPG SRHRAGVLLE ARLPESDVRR
TLDPLVESLL RKGCGVPYRI PVDGGGHLET GGLAVTRRPY RLVERSGAVH PRRFAFGIPT
ESVHWATAAG VRPGVNSVIL GDADAVARAS VLAADARAAD AVGRKGNRVR
|
|---|
| |