| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4609 |
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| Symbol | |
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| ID | 8328807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5490270 |
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| End bp | 5491553 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644945056 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003102288 |
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| Protein GI | 256378628 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCCACT CCATCAGCAG GCGCACCCTG CTGCGCGCCG CGATCGGTGG CGGTGTCGCC
GCGCCGTTCC TGGCGGGGTG CGGCGCGTTG ACGCCCGCGT CCGGCAAACC CGGCGCCCTC
TCGGTGCACA CCCAGCTCAG CGGCGCCGTC GCGGGCGCCA AGGTGTTCGC CGACGCGGTC
GCCGCCTACG AGCGGCGGAC CGGTCGTCCG GTCGCGCTGC TCAAGAACGG CTCCGACCTG
CCCATCGTCT TCGAGACCAG CTCGCTCGCC GGTGCGGAGG CCGACGTCGC CCTGGTGAAC
CTGCAGGGCC GCACGCTCTC CTGGACCGGC CTGGGGGCGA CGATCCCGCT CACCGGGCTG
CTCGACGAGT GGGGGCTGCG CGACAAGATC ATCCCCGAGG CGCTGGCCGA GTGGACCGAC
GGGGACGGCA ACCTGCGCGC GTTCCCGTTC ACCCGCACCA ACTGGCCCGT CTCGTACAAC
ACCAGGCTGC TGGAGCAGGC GGGCGTCCAG ATCCCGACGA CCTCCGACGA GCTGATCGCC
GTGGCGCAGG CGTTGCGCGC CAAGGGGATC GGGCCGGTGA CGGTCGGCGG GTCCGACTGG
AGCGGGCAGA AGATGTTCCT CCAGGTCATC CAGGGCTTCC TCACCCCCGA CGAGGCGAAG
GAGGTGTTCG GCAGCGGCAA GCTCTCCGAG AGCCCCGCCG CCATCGCCGG GGTGGAGCAC
TTCGTGGAGC TGCGGGACGC GGGCGTCTTC GTCGACGACG TGCAGGGCTA CACCTCCGAC
TCGGAGCTGA CCCAGTTCAA CACCGGCAAG GCGGCGATCG TGCCCGCCAT GTCGTCGGCG
CTGGCGAAGG TGCCCGCCGA GCGGGCGAAG GAGGTCGTCG TCGGCGGCTG GCCCAAGCCC
TCGCGCGGCG GCGTGCTGGA GCACCCGAGC GTGATCCGCA GCTTCAACGG CCACGGCATC
TGGATCAGCC GCAGGGGCGC GGAGAAGCTC GACCTGATCA AGCCGTTCGT GCAGGACCTG
TACAGCGACG AGGTGATCGA CTCGATGATC CTGGGCTCCG GCCGGGACAT GAGCCGGATC
ACGGACACGG TCAGCGAGGA CTTCCCGCTC GTCGCGCAGG CCTCCCGCCT CACCGACCAG
CAGGTCTCCC CCGTCATGCT GCCCGACCTG GTCATCCCCC AGTCAGCGTT CGAGCCGATG
ATCCAGGCCA CGGCAGCCGC CTACGGCCCG ATCCCCGCCG AACGGATCAT CGAGGTCTTC
GAACGGGCCT ACGCCACGGT GTGA
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| Protein sequence | MSHSISRRTL LRAAIGGGVA APFLAGCGAL TPASGKPGAL SVHTQLSGAV AGAKVFADAV
AAYERRTGRP VALLKNGSDL PIVFETSSLA GAEADVALVN LQGRTLSWTG LGATIPLTGL
LDEWGLRDKI IPEALAEWTD GDGNLRAFPF TRTNWPVSYN TRLLEQAGVQ IPTTSDELIA
VAQALRAKGI GPVTVGGSDW SGQKMFLQVI QGFLTPDEAK EVFGSGKLSE SPAAIAGVEH
FVELRDAGVF VDDVQGYTSD SELTQFNTGK AAIVPAMSSA LAKVPAERAK EVVVGGWPKP
SRGGVLEHPS VIRSFNGHGI WISRRGAEKL DLIKPFVQDL YSDEVIDSMI LGSGRDMSRI
TDTVSEDFPL VAQASRLTDQ QVSPVMLPDL VIPQSAFEPM IQATAAAYGP IPAERIIEVF
ERAYATV
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