Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4513 |
Symbol | |
ID | 8328710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5354581 |
End bp | 5355729 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644944970 |
Product | histidine kinase |
Protein accession | YP_003102203 |
Protein GI | 256378543 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0449708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTAGGC CGCCGGGGCT GAGCGTGCGG CTCCGGCTGA CCCTCAGCTA CGCCGCGCTG CTGCTGGTCA CCGGCGCGGT GCTGCTCGCG GTGGTGTGGC TGTACCTGCT GCGGTACGTG CCCGACAACG ACCAGGGCCT GCTGGGCGTC TCGCCGAACC GCTACCTGCT GGTGGGGATG TTCGGGCCCG CGGCGGCCGT GGCGCTGGCG GTGCTGCTGC TGTTCGGGCT GGTCGGCGGC TGGTTCCTGG CCGGTCGGGT GCTCGCCCCG CTCACCCGCC TCGCGGACGC GGCGCGCGCG GTGGCGGGCG GCTCGCTCTC GCACCGGGTG CGGTTGCCCG GTCGCGCGGA CGAGTTCCGC GAGCTGGCCG ACCTGTTCGA CGCCATGCTC GACCAGCTCG AAGCGCACGT CGCCGAGCAG CGCAGGTTCG CCGCCAACGC CTCCCACGAG CTGCGCACCC CGCTGGCGAT CACCCAGGCG CTGCTCGACG TGGCCCACGA CGACCCGGCG TGGGACCGGG GCGAGGCGCT GGCGCGGCTG CGGACCGCGA ACCGGCGGGC GATCGACCTG ACCGAGGCGC TGCTGCTGCT CGCCAGGGGC GACAGCGGGA ACCTCGCGCG CGAGCCCGTC GACCTGTCCC TGCTGGCCGA GGAGGCCGCC GAGACGCTGC TGCCGCTGGC CGAGCGGCGC GGGACGGCGC TCGACGTCAC CGGCGGCGCG GCGGTGGTCG ACGGGTCGGC GGAGCTGCTG CTGCGGGTGG TGCTGAACCT GGTGCAGAAC GCCGTCGCGC ACAACCTCCC CGCGAACTCG GGCGGCCGGG TGCTGGTGCG CACGGGGGAG CGGGGCGGGG CGGGTGTGCT GGAGGTCGAG AACACCGGGC CGCTGCTGCC GCCGGAGCTG GTGCCGACGC TGACCGAGCC GTTCCAGCGG GGGGCGCGCC GGGCCCGCGC CGACGAGCAC GCGGGGGTCG GGCTCGGGCT GGCCATCGTG CGCAGCGTCG TCCGCGCGCA CGGCGGGACC CTGCGCCTGG TGGCCAGGCC GGGGGGCGGC CTGCGCGTCA CGGTCGCGCT GCCGCTGGCC GCGGCCTCGG GGCGCGCGCC CACCAGCGGC GGGACGCCAG GGCGGCCAGC GCCGCGCCGG TCGCGTTGA
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Protein sequence | MARPPGLSVR LRLTLSYAAL LLVTGAVLLA VVWLYLLRYV PDNDQGLLGV SPNRYLLVGM FGPAAAVALA VLLLFGLVGG WFLAGRVLAP LTRLADAARA VAGGSLSHRV RLPGRADEFR ELADLFDAML DQLEAHVAEQ RRFAANASHE LRTPLAITQA LLDVAHDDPA WDRGEALARL RTANRRAIDL TEALLLLARG DSGNLAREPV DLSLLAEEAA ETLLPLAERR GTALDVTGGA AVVDGSAELL LRVVLNLVQN AVAHNLPANS GGRVLVRTGE RGGAGVLEVE NTGPLLPPEL VPTLTEPFQR GARRARADEH AGVGLGLAIV RSVVRAHGGT LRLVARPGGG LRVTVALPLA AASGRAPTSG GTPGRPAPRR SR
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