Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4511 |
Symbol | |
ID | 8328708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5353286 |
End bp | 5353966 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644944968 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003102201 |
Protein GI | 256378541 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.11054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGATCC GCGTGCTGCT GGCCGACGAC CAGGCCCTGA TCCGGGCGGG CTTCCGGATG ATCGTCGACG CCGACCCCGG CCTGGAGGTG GTGGCCGAGG CGGCGGACGG CGCGCGGGCC GTCGAGCTGG CCTGCGCCTC GCGGGTGGAC GTGGTGCTGA TGGACCTGCG GATGCCGGAC GTGGACGGCA TCGAGGCGAC CCGCCGCATC TGCGCCGACG AGCGGCTGGC GGGCGTGCGG GTGCTGGTGC TCACCACGTT CGACGACGAC GAGAACGTGA TCACCGCCCT GCAGGCCGGG GCCAGCGGCT TCCTGGGCAA GAACGTGGAC CCGGCCGAGC TGGTCACCGC GATCCGGGTG GTCGCCGAGG GCAACGCGCT GCTGTCGCCG AAGGCCACGC GGGGTCTGGT CAGCGCGTTC GTCGCGCAGT CCCGGCCGCC CGCGGTCGCG GCGCCCGGCC TCGACCTGGT GACCGGGCGG GAGCGGGAGG TCATGGTGCT GGTGGCGCAC GGCATGTCGA ACGACGCGAT CGCCCGGCAC CTGTTCCTGT CCCCGCTGAC GGTCCGCACG CACGTCAACC GCGCCATGGC CAAGCTGGGC GCGCGGGACC GGGCGCAGCT GGTGGTCATC GCCTACCAGA ACCGCCTGGT GGCGCCCGGC GACCCGTCGC CCGCGGGCTG A
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Protein sequence | MTIRVLLADD QALIRAGFRM IVDADPGLEV VAEAADGARA VELACASRVD VVLMDLRMPD VDGIEATRRI CADERLAGVR VLVLTTFDDD ENVITALQAG ASGFLGKNVD PAELVTAIRV VAEGNALLSP KATRGLVSAF VAQSRPPAVA APGLDLVTGR EREVMVLVAH GMSNDAIARH LFLSPLTVRT HVNRAMAKLG ARDRAQLVVI AYQNRLVAPG DPSPAG
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