| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4393 |
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| Symbol | |
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| ID | 8328590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5192055 |
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| End bp | 5192795 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644944855 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003102088 |
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| Protein GI | 256378428 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.287242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCG ACGAGCGCGG GCTCGCGGGC GCCTGGCGGC GGCACCAGCG GCACGACTAC
CCGGACCCGG CGCCGGACCT GGCCCCGTTC GTGGCCCGCC ACTGGCACGT GACCTGGGAC
TACGCCACGC CGTACCACCA GCTGATCGTG CCGCTGCCGA ACGTGCACCT GACGTTCGGC
TCCGGGGGCG CGCTGATCTC GGGCGTCGCG CGCGGCCACT CGACGAAGGT GCTCAGCGGG
CGGGGCGAGG TGCGCGGGGT GGCGTTCCGG CCGGGCGCGT TCCGGGGGTT CCTCGGGGCG
TCCGTGTCGA CGATCACCGG GCGCGTGCTG CCCGCGGAGG AGGTGCTCGG GCCGCTGCCC
GCGCCCGCGT CGACCGCCGA GGTGGAGGAG CTGCTGCGGG CCAGGGCCGT TGAGCCGGAC
CGGGGGGCGC TGGAGGCGGT GCGGGCGGTG GAGCTGATCG AGTCGTCACC GGGGCTGACC
CGCGTGGACG CGGTGGCGCG CGAGCTCGGC GTGGGGGTGC GGAGCCTGCA GCGGCTGTTC
GCGGAGCACG TGGGCGTCGG GCCGAAGTGG GTGGTGCGCC GCCACCGGCT GCGCGAGGCC
ACCGATCGGC TGGCGGCCGG GGGCCGGATC GCCTGGGCGG AGCTGGCGGC CGAGCTGGGC
TACGCGGACC AGGGGCACCT GACCAGGGAC TTCACCGAGG TCTTCGGCGA GCCGCCGACC
ACCTACGCCC GGAGGTACTG A
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| Protein sequence | MTIDERGLAG AWRRHQRHDY PDPAPDLAPF VARHWHVTWD YATPYHQLIV PLPNVHLTFG
SGGALISGVA RGHSTKVLSG RGEVRGVAFR PGAFRGFLGA SVSTITGRVL PAEEVLGPLP
APASTAEVEE LLRARAVEPD RGALEAVRAV ELIESSPGLT RVDAVARELG VGVRSLQRLF
AEHVGVGPKW VVRRHRLREA TDRLAAGGRI AWAELAAELG YADQGHLTRD FTEVFGEPPT
TYARRY
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