Gene Amir_4386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4386 
Symbol 
ID8328583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5184380 
End bp5185381 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content75% 
IMG OID644944848 
Productaminotransferase class I and II 
Protein accessionYP_003102081 
Protein GI256378421 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.933282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCGGA TCGTCCATCA GCTCTCCCTG AACGAGAACC ACTCGCCGCC GCTGCCGGGG 
GTGCCCGAGG CGGTGGCCGG GTTGGTGGAC CGGGTCAACC TCACCCTGGA CCCGCTGTCG
GCGGGCCTGG AGGCGAAGAT CGCCGGGCGC CTGGGCGTCG GCGCGGAGCG CGTGGTGGCC
GGGGTGGGCT CGGCGGCGCT GCTCCAGCAG TTCCTGATGA CCCACGCGGG CGCGGGCTCC
GAGGTCGTGC ACACCTGGCC CTCGTTCGAG ATGTACCCGC TGCTGATCGG CAACTCGCGG
GCCACCGCCG TCGCCGTGCC CGGCCCGGAC GACCGGATGG ACCTCGCCGC CGTGGCCGCC
GCCGTCACCG ACGACACCAA GGTCGTCCTG CTGTGCAACC CGAACAACCC CACCGGCGAG
GTGCTGGACG CCGCCCAGTT GCGTGGCCTG CTCGACGCCC TGCCGCCGCA CGTGCTGCTG
CTGGTGGACG AGGCCTACCG CGAGTTCGCC GACCCCGACG TGGTCGCCGA CGCGCTCGAC
CTGGCGCGGA TCGACGACCG GGTCGCGGTG GTGCGCACCT TCTCCAAGGC GCACGGCCTG
CTCGGCCTGC GCGTGGGCTA CCTGGTCGGC GCGGAGAAGA TCGTCGCGCC GCTGCGCATG
ACCACCCTGT TCTTCCGCGT GCCCACCGTC GCCCAGGCCG CCGCGTCGGC CGCGCTCGAC
GTCGAGGAGC AGGCGCGCCG CAACTGCGCC GCCGTCGCCG TCGAGCGGGA CCGGGTCCGC
GACGGCCTGG TCGAGCTGGG CCTGGACGTG CCGCCCAGCG GCGGGAACTT CGTGTGGGTG
CGGCTCGGCG AGCGCAACGA GGCGTTCCGC GACCACCTGG CCGAGCACGG GATCGCCGTG
CGGGTGCTGG CGGGCGGCAG CGGCGTGCGG GTGAGCACCG GGCTGCGCGA GGCCAACGAC
GCGGTGCTGG CCGCGGCGAA GTCCTTCACC GCCAACGGGT AG
 
Protein sequence
MARIVHQLSL NENHSPPLPG VPEAVAGLVD RVNLTLDPLS AGLEAKIAGR LGVGAERVVA 
GVGSAALLQQ FLMTHAGAGS EVVHTWPSFE MYPLLIGNSR ATAVAVPGPD DRMDLAAVAA
AVTDDTKVVL LCNPNNPTGE VLDAAQLRGL LDALPPHVLL LVDEAYREFA DPDVVADALD
LARIDDRVAV VRTFSKAHGL LGLRVGYLVG AEKIVAPLRM TTLFFRVPTV AQAAASAALD
VEEQARRNCA AVAVERDRVR DGLVELGLDV PPSGGNFVWV RLGERNEAFR DHLAEHGIAV
RVLAGGSGVR VSTGLREAND AVLAAAKSFT ANG