Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4241 |
Symbol | |
ID | 8328434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4998389 |
End bp | 4999657 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644944705 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003101942 |
Protein GI | 256378282 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGCCG GGGGACTGGA CCGACGCTCG TTCCTCGCGG CAGCCGGGCT GCTCGGCCTC GGGCTGGGCG GGCCGTCGCT GGCCGCCTGC GGGTCCAACA CCGGGCGCGA CGGGTCCGCG CCGGGCACGC TCAGCCACTG GTACCACGCC TACGGCGAGG ACGGCGTGCA GGACGCCGTG CGCCGGTACG CCGCCGACTA CCCCGACGCC CGCGTCGAGG TGCAGTGGAA CCCCGGCGAC TACGAATCCA AGATCGCCAC CGCGCTCCAG GGCGGCCGGG TGCCCGACGT GTTCGAGGCC CAGGTCAAGG TCGACTGGGT CCGGCAGCAG CGGGTCGTCC CGCTCGACGA CCTCCTCGGC GACCAGCGCC CCGACTTCGT CAAGACCCTC CTGGACTCGC AGACCGTCGA CGGCAGGCTC TACGGCGTCC CCCAGGCCAT CGACACCCAG GTCCTGTTCT ACCGCCCCAG CCTCCTGCGC GAGGCGGGCG TCACCCCGCC CACCACCGTG GACGAGCTGG TCGACGCCAC CCGCCGCCTG TCCGGCAACA CCGCGCGCGG CTTGTTCGCG GGCAACGACG GCGGCGTCGC CGTGCTCACC GCGCCGCTGC TGTGGTCCGC CGGGCTCGAC CTGCTCAGCC CGGACGGCGA GTCCCCCGGC TTCGACGACC CGCGCGCCGC CACCGCCGTC GGCAAGCTCC GCGAGCTGCA CGCCACGGGC GGCCTCCTGC TCGGCGCCCC TGCCGACTGG GCCGACCCCG GCGCGTTCAC CGAGGGCCTG ACCGCCATGC AGTGGACCGG CCTGTGGAAC CTGCCCAAGA TCGTCGAGGC GCACGGCGAC GACGTCGGCG TCCTGCCCTT CCCGCGCCTG GACGCCGACG GCGCCGAGTC CGTGCCCGTG GGCGCCTACA GCGCGATGGT CAACGCCCGC GCCGCCGACG TCGAGCGCGC CAAGGACTAC GTGCGCTGGC TGTGGGTCGA GCGGACCGAC CACCAGGCCG AGTTCGCCAC CGCCTTCGGC GCGCACCTGC CCGCCCGCGC CAGCCTGCGC CCCGCCGCCG ACCGGCTCAG CGGCGGGCTC GGCGCGGACG TCGCCCAGCT CGTCGCCGAC GTCGGCCGCG TCGCCAGCCC GGCCCGCTGG AGCGCCGCCG CGAACACCGC CCTGTCCGAC GCCGTCTCCC GCGTCGCCCG CGAGGGCGCC GACCCCGCCG AGGAGCTGCG CGCCGCCGTC GCCACCGCCC GCGACGAGCT CACCAGGCTG GACCGGTGA
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Protein sequence | MGAGGLDRRS FLAAAGLLGL GLGGPSLAAC GSNTGRDGSA PGTLSHWYHA YGEDGVQDAV RRYAADYPDA RVEVQWNPGD YESKIATALQ GGRVPDVFEA QVKVDWVRQQ RVVPLDDLLG DQRPDFVKTL LDSQTVDGRL YGVPQAIDTQ VLFYRPSLLR EAGVTPPTTV DELVDATRRL SGNTARGLFA GNDGGVAVLT APLLWSAGLD LLSPDGESPG FDDPRAATAV GKLRELHATG GLLLGAPADW ADPGAFTEGL TAMQWTGLWN LPKIVEAHGD DVGVLPFPRL DADGAESVPV GAYSAMVNAR AADVERAKDY VRWLWVERTD HQAEFATAFG AHLPARASLR PAADRLSGGL GADVAQLVAD VGRVASPARW SAAANTALSD AVSRVAREGA DPAEELRAAV ATARDELTRL DR
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