| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4183 |
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| Symbol | |
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| ID | 8328376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4922638 |
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| End bp | 4924287 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644944647 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_003101884 |
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| Protein GI | 256378224 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1623] Predicted nucleic-acid-binding protein (contains the HHH domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATCACCATCG GTCCACTACC GCCGAGGGCG CGCGCGGCGC TGGCCCTGCT GGCGCTGCAC
ACCGACGTCC GGCGGGGCGT CGACCGGGTC GCGGCCTCGG GGTCCGGCGG GCTGTTCGTG
CTCGGCTGGG ACGACACCGT CGCCGAGGTC TGCTCCGGCG GCTACCCGCT GCGCGGCGTC
ACCGCCACCC CCGAGAACCT GGCCCAGACC GCCAAGATGG ACCTCGCCGT GGTGCTCGGC
GGCGACGGCC TCGCCGAGAT CGTCCGCGCC CACGCCGCGC TCCACCCCCG CTCGAACCAC
GTCCAGCCCG GCCACGGCGC CCGGCACGCC ACCGCCGCGA ACACCGCGCG CGACGTCGCC
GTCCCGGTGG TCGCGGTCAG CGAGGAGACC GGCGTCGCGA CCCTCTACGC GGGCGAGCAC
CGGGTCGTGC TCACCGAGCC GAGCGCGCTG CTGAGCAAGA CCGCCGTCCA CGTGCTGCTG
CTCGACTCGC GCGTCGGCGA CCTGCGCGAC CCCGCGCTCG ACCCGGCCCG CGCCGACGGG
CTGCGCGCCG AGGCGGGCGC CCTGCTGGAC GAGCTGGACC TGCTGCTGCT GGAGCTGGGG
GAGCACGGCG CGGTCGCGGC CGAGCTGGTC GCCGGGTACC GCAGGGAGCT GGCCGCCGGT
CCCGACGAGG GGCGCGCGTC CGCGCCCGGT GACGCCGACG AGTGGTGGGA CCACGCGCTC
GCGCACGTGG CCGCGCTGCT CTCCGGGACG CCCGGTCCGA CCCCGGCCGA CCCGACCCTG
CCCGAGCTGC GCTTCCGCGA CGAGGGGCAC GCGCTGGCCT GGTTGGACAA GCGCTGGGCC
GCGCTGCTCC GCGCCACCCG GCGGGCGCTG GACGGCGGCG ACCACCGCAC CGCGCTGCGC
AGGCTCACCC TGGCCCTGGA CTACTGCTAC CGCCGCAAGC CGTGGCGGGA CTGGATCGAA
CCGGCCACCG GCGCCGCGCT CATCGCCAGG AGGGTCGGCG ACCGGGCCGC CGAGGCCGCC
CTGCTGTCCA CCCTCGGCCT GGCGCACCGC GAGCGGCGCG ACCACGACGT CGCCGTCGCA
CTGCTGTCCC TGGCCGACCG GGCGTGGGAC GAGCTCGGCG ACCCGCGCGG CCGGGCCGTC
GCGCTCAACC GGCTCGCCTA CGCCCACGCC GAAGCAGGCG CCACCGACCT GGCACTGGGC
CTGGCCGGGC AGGCGCTCGA CCTCGCGGCG GGTGCCGGTG ACCCGAGGTT GGAGGGCGTG
GTGCTCAACA ACCTGTGCGG CGCGCACCGC AGGGCGGGCG ACCTGGTCGC GGCGCTGGCG
CACGGCGACC GGGCCGCCGA GGCGTTCCGG CGCGCCGGGC ACCACCAGGG CCTCGCCTGG
GCCGAGGTGA TGCGCGGCAA CGTCCACCAC GACGCCGGGC GCCACCTGGC CGCCCTGGAC
TGCTACCGCG CCGCGCTCGC CGTCCGGGAC GCGGCCGACG ACCGGTACGG GGTCGCGGTG
TGCCACCACG ACCTGGCCAG GGCGCTGCTC GCGTCCGGCG ACCGGGCGGG CGCGCAGGAG
CACCTGGACC TGGCGCTGGC GCACTTCGAC GCCATCGGCG ACCCGCGCGC GGGGGACGTG
CGGGAGCTGC TGCGCGAGGC CGCGGGCTGA
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| Protein sequence | MTIGPLPPRA RAALALLALH TDVRRGVDRV AASGSGGLFV LGWDDTVAEV CSGGYPLRGV
TATPENLAQT AKMDLAVVLG GDGLAEIVRA HAALHPRSNH VQPGHGARHA TAANTARDVA
VPVVAVSEET GVATLYAGEH RVVLTEPSAL LSKTAVHVLL LDSRVGDLRD PALDPARADG
LRAEAGALLD ELDLLLLELG EHGAVAAELV AGYRRELAAG PDEGRASAPG DADEWWDHAL
AHVAALLSGT PGPTPADPTL PELRFRDEGH ALAWLDKRWA ALLRATRRAL DGGDHRTALR
RLTLALDYCY RRKPWRDWIE PATGAALIAR RVGDRAAEAA LLSTLGLAHR ERRDHDVAVA
LLSLADRAWD ELGDPRGRAV ALNRLAYAHA EAGATDLALG LAGQALDLAA GAGDPRLEGV
VLNNLCGAHR RAGDLVAALA HGDRAAEAFR RAGHHQGLAW AEVMRGNVHH DAGRHLAALD
CYRAALAVRD AADDRYGVAV CHHDLARALL ASGDRAGAQE HLDLALAHFD AIGDPRAGDV
RELLREAAG
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