| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4089 |
|---|
| Symbol | |
|---|
| ID | 8328282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4804602 |
|---|
| End bp | 4805828 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644944554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003101791 |
|---|
| Protein GI | 256378131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0942983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGCGG CGTTCGCCGC CGTCGTGACC GCGCTCGTGC TGTCCACCCT GGCGCTCGGC
GACGCGATGC CGATGCTGGA GCGCGACTTC AAGGTGTACG TCATCAGCGG TCAGGCGGTG
CTCGACGGCG TCTCCCCGTT CGACGTCTCC ACCGACGCGG GCCTGCTGTT CATCTACTCG
CCGTTCGCCG CCCTGCTGTT CGTCCCGATC GCCCTGCTCG ACATGCACCT GGCGTTCGCG
CTGTGGACGT TCGCCTCCAC GTTCGCCCTC ACCGCCTGCA CCTGGCTCCT GCTCGGCCTG
GCCACCCCGC TCGCGCCCCG CAAGCGCACC GGGTTCGCGC TGCTCGCCTC GGTCGCCGCG
CTCGGCACCG CCCCGGTGTG GCCGATGGTG TTCAACGGCC AGATCAACCT GCTGCTGATG
CTGGTGATCC TGGTCGACCT GCTGCGCGGC CCGTCCCGCT ACCGGGGCGT GGCGATCGGC
CTGGTGGCCG GGATCAAGCT GACCCCGCTC ATCTTCGTCC CGTACCTGCT GCTCACCGGC
CGGGCCCGCG CGGCGGCCGT GGCGACGGGG ACGTTCCTGA CCACCGTGCT CGTCGGCTAC
CTGGCGCTGC CCGGCCCGTC CGGCCAGTGG CTCAGCGGCC TGATGCTGGA CACCACGCGG
ATGATGCCCC CGGACCACGG CCCGTGGAAC GAGTCGCTGC GCGGGGTCCT CGGCCAGCTG
CCGGGGGTGC TGCACGCGCC GTGGTTCGGC GTCGCGATGA CCGTCCTGGT CGGCCTGGCC
GGGCTCGTGG TCGCGGTGCG GGCGACCCGG CGCGGGCAGG TGGCCGGGGG AGTGCTGGCC
TGCGCGGTGA CCGGCACCCT GGTGTCCCCG GTGTCCTGGC CGCACCACTG GGTGTGGGTG
GTGCCCGGCG CCGCGGCCTG GCTGTGGTGG GCGCTGCGCA CCGGCCGGGC CGGGCACGCG
CGCGCCGCGC TCGCCACCTG GGTGGTGATG ATCGTCTCCG GCGTGGTGAT GCTGCTGGAC
GACTCGCCGG TGGCGGACCT GGTGGTCAAC GTGATCAGCC TGTCCGAGGC GGGCCTGTTC
GCGCTGAACG TGCTGCCGGT GCTCGGCGGC CTCGCCCTCC TGGTCGCGCT CGCGCTCCCC
GCGCGCCACC GGGTCGACCC CGCGGCGGAA CCCGCGCCCG GCACCACTCC CGACACCCCG
GCGCAGCGCC CGCTCCTGGA GCGCTGA
|
|---|
| Protein sequence | MSAAFAAVVT ALVLSTLALG DAMPMLERDF KVYVISGQAV LDGVSPFDVS TDAGLLFIYS
PFAALLFVPI ALLDMHLAFA LWTFASTFAL TACTWLLLGL ATPLAPRKRT GFALLASVAA
LGTAPVWPMV FNGQINLLLM LVILVDLLRG PSRYRGVAIG LVAGIKLTPL IFVPYLLLTG
RARAAAVATG TFLTTVLVGY LALPGPSGQW LSGLMLDTTR MMPPDHGPWN ESLRGVLGQL
PGVLHAPWFG VAMTVLVGLA GLVVAVRATR RGQVAGGVLA CAVTGTLVSP VSWPHHWVWV
VPGAAAWLWW ALRTGRAGHA RAALATWVVM IVSGVVMLLD DSPVADLVVN VISLSEAGLF
ALNVLPVLGG LALLVALALP ARHRVDPAAE PAPGTTPDTP AQRPLLER
|
|---|
| |