Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4072 |
Symbol | |
ID | 8328265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4782775 |
End bp | 4784049 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644944537 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003101774 |
Protein GI | 256378114 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000314908 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGCGT CGTCGTCGCC ACTGCCGCCG TCGTCGGAGG CGACCGAGCG GTTCGAGCCG GTCGCGCGGT CCTCGGGGCC GCCGTCGCCG CCCCGGCTGG CGCCGGCGGA CCTGCTGTCG CTGGGCATGA TCGGGCTGCG GACCCGGAAG CTGCGGGCGG TGCTGTCGGC GCTGGGCATC TCGTTGGGGA TCGCGACGGT CGTGGTGGTG ACCGGCATCC CGGCGTCCGG GCAGCGGGCG CTGATGGACG AGCTGACCGC GTTGGGCACC AACACGTTGC GGGCGCAGAT GGCCCCCAGC GGGCAGGAAC CCGTTCCGCT GCCCGAGGCC TCGGCGGGGA TGGCCGGGCG GATCGGGCCG GTGACGGCGT CGGCCGCGGT GGCCAACACG CACACCCGCG TGCGTCGGTC CGACCTCATG GGTGATTCTG CGAGTTCCGA CCTCACGGTG CTCGCAACCA GCCTCGGACT CCTGGAGACC GTGAACGGGA GAGTGGCGAG CGGGGAGTAC ATCACCGGGT CGACCCAGGC GTTTCCGTTC GTGGTGCTGG GACACGTGGC GGCGGGCAGG CTCGGGATCG ACCGGGTTCC GGAGACCGGC GAGCGGCCGA CGGTCCACAT CGGACGGACC AGGTTCACCG TGGCGGGGGT GCTGGCCCCG ATGCCGCTCG CGCCGGACGT CGAGCGGTCG GTGCTCGTCG GGTGGGACGC GGCGAAGGCG GAGCTGGGGT TCGACGGGCG GCCGACGGTG GTCTACGTCA AGGCGCGCGA GGAGTCCGTC GAGGCGGTGC GGACGGCGCT GGCCGCCACG CTGCACCCGG AGGCTCCGGG CAAGGTGCAG GTGAGCAGGC CGTCCGACGC GTTGGCGGCG AAGCGGGCGA CCGAGAGCTC GTTCTCGGCG CTGCTGCTGG GGCTGGCCGG GGTGGCGCTG CTGGTCGGCG GGGTCGGGGT GGCCAACACG ATGGTCATCT CGGTGCTGGA GCGGCGGCGG GAGATCGGGC TGCGGCGGGC GCTCGGGGCG ACGCGCGGGC AGATCCGGGG GCAGTTCCTC ATCGAGGCGG TGCTGCTGTC GGCGCTGGGC GGGGTGGCGG GGACGGGGCT CGGGGTGGTC GCGGTGATCG GGTACGCGGG GCTGCGCTCG TGGCCGGTCG TGATCCCGGT GGCGGCGGTG GGCGGCGGGG TGGTCGCGGC CGTCGTGGTG GGGGCGGTGG CGGGGCTGTA CCCGTCGATC CGGGCCAGCC GGTTGACGCC CACGCAGGCG CTGGCGGCGC AGTAG
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Protein sequence | MNASSSPLPP SSEATERFEP VARSSGPPSP PRLAPADLLS LGMIGLRTRK LRAVLSALGI SLGIATVVVV TGIPASGQRA LMDELTALGT NTLRAQMAPS GQEPVPLPEA SAGMAGRIGP VTASAAVANT HTRVRRSDLM GDSASSDLTV LATSLGLLET VNGRVASGEY ITGSTQAFPF VVLGHVAAGR LGIDRVPETG ERPTVHIGRT RFTVAGVLAP MPLAPDVERS VLVGWDAAKA ELGFDGRPTV VYVKAREESV EAVRTALAAT LHPEAPGKVQ VSRPSDALAA KRATESSFSA LLLGLAGVAL LVGGVGVANT MVISVLERRR EIGLRRALGA TRGQIRGQFL IEAVLLSALG GVAGTGLGVV AVIGYAGLRS WPVVIPVAAV GGGVVAAVVV GAVAGLYPSI RASRLTPTQA LAAQ
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