Gene Amir_4068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4068 
Symbol 
ID8328261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4778416 
End bp4780200 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content74% 
IMG OID644944533 
Producthistidine kinase 
Protein accessionYP_003101770 
Protein GI256378110 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.379101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCGTA GCGTGTTCTT CCGGTTCCTC GGCGTCACGG TGCTGGTCGC CCTGTGCTCG 
ATCGCCACGA CCGCGTGGCT GGCCGCGCAG CTCACCCGCG CCTCCATCGA GCGCGAGCAG
GGCCAGGAGC TGTCGGTCGA CGCCCGCATC TACACCACCC TGCTCACGCA CGCGGTCGAG
CACCGGGACT GGAGCGCGGT CGGCCCGGTC GTGGCCGAGC TGGTGCGCCG GCACCCGACG
CGGCGGGTCA CGCTGCTGTC CAAGGACGGC GTCGTCCTGG CCGACGTCGG CGGCCACGGC
CCGCTGCCCA CCACCGCCTC GGCCGTGGTC GACCCGCTGT CGGTCGACCC GGTGCTGGTG
CCCGACGCGC CCGCGGACCG CGTCGACCCG CGCCTGGGCG AGCCGTACCG GGTGCTCGCG
TCCCTGATGC CGAGCGACCC GTCGCAGGTA GCGGAGCCGG CCCCCGAGCG GGAGCCGGAG
ATCCGCACCG TCCCGGCCGA CCCGCACCAC CTGGTCCAGT CGTTCCTCAA GTGCCACTAC
GTCCAGCAGG ACGACGCCGG AGCCGGCGCG GAGTTCCTCA GGGAGTGCGA CGACCTGCTG
GAGGGCGAGC TCCTGGACGC CGCGCGAGCC CTGCTCGGCC TCGAGGAGCG GACCAACACC
TGCCTGGCGG GCCGGGCCCA GGACCCCGTC CACCTGGAGC TCGACCTCAC CCCGTACCGG
GAGGAGCGCC TGACCGACGA CCAGCGCACC GCCGCCGAGG CGTGCGTGTC GGACTCCCGC
CACGCGAACC TGTCCGAACG CGTCCCACCC CCCGCGCTGC TCTACGTGAC CGTGCCGACG
GGCGCCCCGG TCGCCTCGTT CGACCTCTCC CCGGACAACT GGTGGCGCGT GGCAGCCGCA
GCCGGGGCCA TCGCGCTGGC CGCCGTGGTG GTGACGGCGC TGGCGTGCGC CAGGATCATC
CGCCCGCTCC GCGAGCTGAC CACCGCCGCC CACCGCATGT CCCTGGGCGG CGACACCGAG
CCCCTGGCCG TGCGGGGCCG CGACGAGATC GCCAGGCTCA CCGAGGCGTT CAACACCATG
GCGCAGGCCA GGGCCAGGCT GGAGGGCCTG CGCAAGGCCG CCGTCAGCGA CACCGCGCAC
GAGCTCCGCA CCCCGCTCAG CAACATCCGG GGCTGGCTGG AGGCCGCCGA GGACGGCGTG
ACCGACCGCG ACCCAGAACT GATCGCCCTG CTCCTGAAGG AGGCCCTGGC CCTCCAGCAC
ATCGTCGACG ACCTGCAAGA CCTGGCCGTG GCCGACGCGG GCGGCCTGCG CCTAACCGTG
TCCCCCCAAC CCCTCACCAC CGTCCTGGAT CGCCTGCGCG CCGCCCACGA GACGACCGCG
ACCCGCGCGG GCATCACCCT CACCACCTCC GCACCGGACA CCCTCACCGC CGAGGCCGAC
CCGGTGCGCC TGAGACAGGT CCTCGACAAC CTCGTCGCCA ACGCCGTGCG ACACGTCCCA
CCCGGAGGCC GGGTCGAGGT GACCGCGGAG CGCGACGGCG ACGAGGCCGT CATCACGGTC
ACCGACACCG GCACCGGCAT CACCCCCGAA GACCTCCCCC ACGTGTTCGA CCGCTTCTGG
CGAGCCGAGA AGTCCCGCAG CAGACGAACC GGCGGCAGCG GCCTGGGCCT GGCCATCGTG
CGCAAGCTGG TGGAGGCGCA CGGCGGAACG GTCTCGGCGA CCAGCGAACC CGGAGCAGGC
TCGATCTTCA CCGTGCGCCT GCCCGCACCG ACCACCCCCG CCTGA
 
Protein sequence
MRRSVFFRFL GVTVLVALCS IATTAWLAAQ LTRASIEREQ GQELSVDARI YTTLLTHAVE 
HRDWSAVGPV VAELVRRHPT RRVTLLSKDG VVLADVGGHG PLPTTASAVV DPLSVDPVLV
PDAPADRVDP RLGEPYRVLA SLMPSDPSQV AEPAPEREPE IRTVPADPHH LVQSFLKCHY
VQQDDAGAGA EFLRECDDLL EGELLDAARA LLGLEERTNT CLAGRAQDPV HLELDLTPYR
EERLTDDQRT AAEACVSDSR HANLSERVPP PALLYVTVPT GAPVASFDLS PDNWWRVAAA
AGAIALAAVV VTALACARII RPLRELTTAA HRMSLGGDTE PLAVRGRDEI ARLTEAFNTM
AQARARLEGL RKAAVSDTAH ELRTPLSNIR GWLEAAEDGV TDRDPELIAL LLKEALALQH
IVDDLQDLAV ADAGGLRLTV SPQPLTTVLD RLRAAHETTA TRAGITLTTS APDTLTAEAD
PVRLRQVLDN LVANAVRHVP PGGRVEVTAE RDGDEAVITV TDTGTGITPE DLPHVFDRFW
RAEKSRSRRT GGSGLGLAIV RKLVEAHGGT VSATSEPGAG SIFTVRLPAP TTPA