Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4049 |
Symbol | |
ID | 8328242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4762001 |
End bp | 4762753 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644944519 |
Product | ABC transporter related |
Protein accession | YP_003101756 |
Protein GI | 256378096 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0191001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCGCG GGAACGCCGC CGCGCGGGAG GAGCTGGACG GGTGGCGGTT GGCGGCCGTC GACCTGGTCA AGGTGCACCG GCAGGGCGGA GCCGAGGTCC GGGCGCTGGA CGGGGTCACG GTCTCCTTCG GGGCCGGGCG GTTCACGGCC GTCACGGGCG CGTCCGGGTC GGGCAAGTCC ACGCTGCTGC ACTGCCTCGC CGGGGTGGAC GTCGCGACGT CCGGCCGGGT GCTCCTGGGC GGGCAGGAGC TGAGCGGGCT CACCGAGCGG GCGCTCACCC GCGTCCGGCG CGACCGGGTC GGGTTCGTGT TCCAGGCGTT CAACCTGCTG CCCCAGCTGA GCGCGGAGCG GAACATCACG CTGCCGCTCG ACCTGGCCGG GCGGGACGTC GACCGGGAGC TGTTCGAGCA CCTGGTGGGC GTGCTCGGTC TCGGCGACCG GCTGGGGCAC CGGCCGGGTG AGCTGTCCGG TGGGCAGCAG CAGCGGGTGG CGCTGGCGCG GGCGCTGATC GGGCGGCCCG ACGTGGTGTT CGCGGACGAG CCGACCGGCA ACCTGGACTC GCGCTCCGGA GGTGAGGTGC TGGCGTTCCT GCGCGAGTCG GTGCGGGAGC TGGGGCAGAC CGTGGTGATG GTGACGCACG ACCCCGTGGC GGCCTCGTAC GCGGACCGGG TCGTCGCGCT CGCGGACGGG AAAGTGGTGC GGGACCAGGA CAACGCCCCG GCACGGCGTC GGGACGGCGG GGTGGCGCGG TGA
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Protein sequence | MTRGNAAARE ELDGWRLAAV DLVKVHRQGG AEVRALDGVT VSFGAGRFTA VTGASGSGKS TLLHCLAGVD VATSGRVLLG GQELSGLTER ALTRVRRDRV GFVFQAFNLL PQLSAERNIT LPLDLAGRDV DRELFEHLVG VLGLGDRLGH RPGELSGGQQ QRVALARALI GRPDVVFADE PTGNLDSRSG GEVLAFLRES VRELGQTVVM VTHDPVAASY ADRVVALADG KVVRDQDNAP ARRRDGGVAR
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