Gene Amir_4049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4049 
Symbol 
ID8328242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4762001 
End bp4762753 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content75% 
IMG OID644944519 
ProductABC transporter related 
Protein accessionYP_003101756 
Protein GI256378096 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0191001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCGCG GGAACGCCGC CGCGCGGGAG GAGCTGGACG GGTGGCGGTT GGCGGCCGTC 
GACCTGGTCA AGGTGCACCG GCAGGGCGGA GCCGAGGTCC GGGCGCTGGA CGGGGTCACG
GTCTCCTTCG GGGCCGGGCG GTTCACGGCC GTCACGGGCG CGTCCGGGTC GGGCAAGTCC
ACGCTGCTGC ACTGCCTCGC CGGGGTGGAC GTCGCGACGT CCGGCCGGGT GCTCCTGGGC
GGGCAGGAGC TGAGCGGGCT CACCGAGCGG GCGCTCACCC GCGTCCGGCG CGACCGGGTC
GGGTTCGTGT TCCAGGCGTT CAACCTGCTG CCCCAGCTGA GCGCGGAGCG GAACATCACG
CTGCCGCTCG ACCTGGCCGG GCGGGACGTC GACCGGGAGC TGTTCGAGCA CCTGGTGGGC
GTGCTCGGTC TCGGCGACCG GCTGGGGCAC CGGCCGGGTG AGCTGTCCGG TGGGCAGCAG
CAGCGGGTGG CGCTGGCGCG GGCGCTGATC GGGCGGCCCG ACGTGGTGTT CGCGGACGAG
CCGACCGGCA ACCTGGACTC GCGCTCCGGA GGTGAGGTGC TGGCGTTCCT GCGCGAGTCG
GTGCGGGAGC TGGGGCAGAC CGTGGTGATG GTGACGCACG ACCCCGTGGC GGCCTCGTAC
GCGGACCGGG TCGTCGCGCT CGCGGACGGG AAAGTGGTGC GGGACCAGGA CAACGCCCCG
GCACGGCGTC GGGACGGCGG GGTGGCGCGG TGA
 
Protein sequence
MTRGNAAARE ELDGWRLAAV DLVKVHRQGG AEVRALDGVT VSFGAGRFTA VTGASGSGKS 
TLLHCLAGVD VATSGRVLLG GQELSGLTER ALTRVRRDRV GFVFQAFNLL PQLSAERNIT
LPLDLAGRDV DRELFEHLVG VLGLGDRLGH RPGELSGGQQ QRVALARALI GRPDVVFADE
PTGNLDSRSG GEVLAFLRES VRELGQTVVM VTHDPVAASY ADRVVALADG KVVRDQDNAP
ARRRDGGVAR