Gene Amir_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3992 
Symbol 
ID8328185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4676336 
End bp4677082 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID644944465 
ProductNmrA family protein 
Protein accessionYP_003101702 
Protein GI256378042 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGA AGATCGCAGT GGCCGGGGGG ACCGGGACCG TGGGCCGCAA GGTCGTCGCG 
GCGGTGGAGT CGGCCGGGCA CGAGGCCGTG GTGCTGTCGC CGTCGCGCGG CGTGGACCTG
GTCACCGGCG AGGGGCTCGA CGCGGCGCTC GCCGGGTGCG CGGGCGTGAT CGACGTGGCG
AACACGGCGG TGTGGGACCG GGAGAGCGCC GAGCGGTTCT TCGGGACCGT GGCGACCAAC
CTGGTCGAGG GGTGCGCGCG GCACGGGGTC GGGCACCTGG TGGTGCTGGG GATCGTCGGG
ACCGACGAGG TGGACCTCGG GTACTACTAC GGCAAGCGCC TGCAGGAGCG GATCGTGTCC
GAGGGGCGGG TGCCGTGGAC GATCCTGCGG GCCACCCAGT TCTTCGAGTT CGCCGAGCAG
AACACCGCGC GGGCCGAGGG CGACGTGGTG GAGCTGATGC CGATGCTGTC GCAGCCGGTG
GCGACCGAGG ACGTGGCCGA GCGGCTGGTC GAGCTGGTCA CCGGGGAGCC GCAGGGGCGG
GCCAGGCCGT TGGCGGGGCA GGAGAAGCTC ACCCTGGCGG AGATGGCGCG GCTGCTGTTC
GAGCGCACCG GCGACCGGCG GGAGATCCGG GTGCGGGAGC TGGGCGAGGT CGGGGCGCAG
CTCGCGTCCG GCGCGCTCAC CCCCTCCGGC GAGCACGACC GGGGCAAGCG CACGTTCGCG
GACTACCTGG CGGCGCTGGA GGTCTGA
 
Protein sequence
MTMKIAVAGG TGTVGRKVVA AVESAGHEAV VLSPSRGVDL VTGEGLDAAL AGCAGVIDVA 
NTAVWDRESA ERFFGTVATN LVEGCARHGV GHLVVLGIVG TDEVDLGYYY GKRLQERIVS
EGRVPWTILR ATQFFEFAEQ NTARAEGDVV ELMPMLSQPV ATEDVAERLV ELVTGEPQGR
ARPLAGQEKL TLAEMARLLF ERTGDRREIR VRELGEVGAQ LASGALTPSG EHDRGKRTFA
DYLAALEV