Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3992 |
Symbol | |
ID | 8328185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4676336 |
End bp | 4677082 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644944465 |
Product | NmrA family protein |
Protein accession | YP_003101702 |
Protein GI | 256378042 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGA AGATCGCAGT GGCCGGGGGG ACCGGGACCG TGGGCCGCAA GGTCGTCGCG GCGGTGGAGT CGGCCGGGCA CGAGGCCGTG GTGCTGTCGC CGTCGCGCGG CGTGGACCTG GTCACCGGCG AGGGGCTCGA CGCGGCGCTC GCCGGGTGCG CGGGCGTGAT CGACGTGGCG AACACGGCGG TGTGGGACCG GGAGAGCGCC GAGCGGTTCT TCGGGACCGT GGCGACCAAC CTGGTCGAGG GGTGCGCGCG GCACGGGGTC GGGCACCTGG TGGTGCTGGG GATCGTCGGG ACCGACGAGG TGGACCTCGG GTACTACTAC GGCAAGCGCC TGCAGGAGCG GATCGTGTCC GAGGGGCGGG TGCCGTGGAC GATCCTGCGG GCCACCCAGT TCTTCGAGTT CGCCGAGCAG AACACCGCGC GGGCCGAGGG CGACGTGGTG GAGCTGATGC CGATGCTGTC GCAGCCGGTG GCGACCGAGG ACGTGGCCGA GCGGCTGGTC GAGCTGGTCA CCGGGGAGCC GCAGGGGCGG GCCAGGCCGT TGGCGGGGCA GGAGAAGCTC ACCCTGGCGG AGATGGCGCG GCTGCTGTTC GAGCGCACCG GCGACCGGCG GGAGATCCGG GTGCGGGAGC TGGGCGAGGT CGGGGCGCAG CTCGCGTCCG GCGCGCTCAC CCCCTCCGGC GAGCACGACC GGGGCAAGCG CACGTTCGCG GACTACCTGG CGGCGCTGGA GGTCTGA
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Protein sequence | MTMKIAVAGG TGTVGRKVVA AVESAGHEAV VLSPSRGVDL VTGEGLDAAL AGCAGVIDVA NTAVWDRESA ERFFGTVATN LVEGCARHGV GHLVVLGIVG TDEVDLGYYY GKRLQERIVS EGRVPWTILR ATQFFEFAEQ NTARAEGDVV ELMPMLSQPV ATEDVAERLV ELVTGEPQGR ARPLAGQEKL TLAEMARLLF ERTGDRREIR VRELGEVGAQ LASGALTPSG EHDRGKRTFA DYLAALEV
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