| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3770 |
|---|
| Symbol | |
|---|
| ID | 8327962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4434884 |
|---|
| End bp | 4436146 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644944260 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003101498 |
|---|
| Protein GI | 256377838 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00377745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCGA CCACGACGCG CGTGCGCGCG GGCTACGCGC TGGGTTCCCT CGTCACCGGG
GCGTTCGGCA CCGTCCCCGG TCTGCTCCTG CTGCCCTACC TCACCGACTC GCTCGCCGTG
CCCGCCGCCG TCGCGGGCGC GCTGGTGCTG GTCCCCAAGG CGTGGGACGT GCTGTTCAAC
CCGGTCGCCG GGCGGATCAG CGACCGGGTC GGGGCGCGGC GGCCGTTCCT GCTGGGCGGG
GGCGCGGCCA CGGCCGCGCT GTTCGCGGCG CTGTTCGCCG GAGTCGGGGA CGGGTGGGGC
GCGGCGGCGT ACGTGGCCGC CGTGTTCCTG CTGTGCGCCA CCGCCTACGC GTTCTTCCAG
GTGCCCTACG TGGCGATGGC CGCGGAGATC ACCGACGACT ACCACGAGCG CACCCGGCTG
CTGGCGTGGC GGGTCGCGGT GCTGGCGCTG GCGATCCTGG TGAGCGGGGC GGGCGCGCCC
GCCGTGCGGG ACCTGGTCGG GGGCGCGGAC GGGTACCGGG TGATGGGGGT CGCGGTGGGG
GCGCTGATCC TGGTGGGGAC CCTGGCCTCG GTGGTGGGCA CGCGCGGGGC GCCCGTGCGG
CGGGACCCCG CGGCGCCGTC GGCCCGCGAC TTCCTGGTGG CGCTGCGGGT CCGGGCGTTC
CGGCGGCTGC TGGCGGTGTT CTCGGTCCAG GCGGTCGGGC TGGGCGCGAT GCTCGCCGGG
GTGGACTACT TCGCGCGGCT CGTCCTGGGC GACCGGTCGG CGCAGACGGC GCTGTTCGCC
GCGTTCGTGG GGCCCGCGCT GCTGGTGATG CCGCTGTGGC AGCGGGTGGG GCGGCGGGTC
GGCAAGCGGA CCGGGCTGGT CGTGGCCTCG GCGCTGTTCG CGGTCGCGGC GGCCGGGCTG
GGGGCGGCGG GGGTGCTGCC GGGCGCGGCC GTGGTGGCGG TGATGGCGGT GGCGGGCGTC
GGGTACGCGG GGATGCAGGT GTTCCCGATG GCGATGCTGC CGGACGTGAT CAGCTCGGTC
GACGGGCGGC GCGCCGGGCT GTTCTCCGGG GTGTGGACGG CGGGCGAGAC GCTCGGGCTG
GCGCTGGGGC CGGGCGCGTA CGGGGTGGTG CTGGCGGTGG GCGGGTACGC GGCCAGCACG
AGCGGGGACG TCACCCAGAC GAGCGGCGCG GTGCTGGCCG CGCTGGTCGG GTTCACCGCG
CTGCCCGCGC TGCTCGCCGT GCTGCCCCTT CCGCTGCTGC CCCGTGAGGA GACTCCCCGG
TGA
|
|---|
| Protein sequence | MQPTTTRVRA GYALGSLVTG AFGTVPGLLL LPYLTDSLAV PAAVAGALVL VPKAWDVLFN
PVAGRISDRV GARRPFLLGG GAATAALFAA LFAGVGDGWG AAAYVAAVFL LCATAYAFFQ
VPYVAMAAEI TDDYHERTRL LAWRVAVLAL AILVSGAGAP AVRDLVGGAD GYRVMGVAVG
ALILVGTLAS VVGTRGAPVR RDPAAPSARD FLVALRVRAF RRLLAVFSVQ AVGLGAMLAG
VDYFARLVLG DRSAQTALFA AFVGPALLVM PLWQRVGRRV GKRTGLVVAS ALFAVAAAGL
GAAGVLPGAA VVAVMAVAGV GYAGMQVFPM AMLPDVISSV DGRRAGLFSG VWTAGETLGL
ALGPGAYGVV LAVGGYAAST SGDVTQTSGA VLAALVGFTA LPALLAVLPL PLLPREETPR
|
|---|
| |