Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3762 |
Symbol | |
ID | 8327954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4425940 |
End bp | 4427070 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644944252 |
Product | SpoOM family protein |
Protein accession | YP_003101490 |
Protein GI | 256377830 |
COG category | [R] General function prediction only |
COG ID | [COG4326] Sporulation control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.548375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAGC GGATGCTGAG CGCCTTCGGC GTCGGCGGCC CGTCGGTCGA CACCGTGCTG GACTCCCCGC ACACCGCGCC CGGCCAGCTG ATCAGCGGCC AGGTGCGCAT CCAGGGCGGC AGCTCCGAGG CGGTCATCGA CCAGGTCGTG CTGTCCCTGG TGACCCGCGT CGAGGTCGAG CGGCACGACA ACGAGTACGC GGGCGTTGCC GAGTTCCTGC GGGTCGCGGT CGCCCACAAC GTGCGCGTCG CCGCGAACCA GCCGCTCTCC GTGCCGTTCC AGATCCCGGT GCCGTGGGAG ACCCCGGTGA CCGCCGTCGG CGGCGCGCCG CTGCCCGGCG TGTCCGTGGG CGTGCGCACC GAGCTGGTCA TCGCGGGCGC CCCCGACAAG GGCGACCTCG ACCCGGTGCT GATCTCCCCG CTGCCCTCGC AGGACCGCGT GCTCCAGGCG TTCGGGCAGC TCGGCTTCCA GTTCCGCAAG GCGGACGTCG AGGCAGGCCG CATCCACGGC GTCAACCAGG AGCTCGGCTT CTACCAGGAG CTGGAGTTCT TCCCGCCGCA GCAGTTCGCG GGCCGGGTCA ACGAGGTCGA GCTGACCTTC GTCGCGAACC CGCACGAGCT CGTCGTGGTC CTGGAGGCCG ACAAGCGCGG CGGCGTGTTC AGCTCCGGTG GCGACGCGTT CGGGCGCTTC CACGTGTCGC ACAACGACGC CATGCACACC GACTGGGCGT CCGCCATCGG GCAGTGGCTC ACCCAGGTGG TCGAGCGCGG TGGTCACGGC GCGTTCGGCG GTCAGCCCGG TTACGGCGCG AACCCGGCGT TCGGCGGCAA CCCCGCGTTC GGCGGCCAGC CCGGCTACGG GCAGCCCGGC GGTTACGGCC AGCCCGGCTA CGGTCAGCCC GGCGCCTACG GGCAGCCCGG TTACGGTCAG CCGGGTTACG GCGGCCAGCC CGCCTACGGC TACGACCAGC ACCACCACCA GGAGCGTCGC GGCCCCGGCA TGGGCGCGGT CGTCGGCGGC GTCGCGGCGG GCGTCGTCGG CGGCATGATC CTCAACGAGG TCATCGACGA GGTCGGCGAC TCGTTCGAGG ACGAGGGCGA GGACTTCGCG GGCGGCTTCG ACGAGGAGTG A
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Protein sequence | MFKRMLSAFG VGGPSVDTVL DSPHTAPGQL ISGQVRIQGG SSEAVIDQVV LSLVTRVEVE RHDNEYAGVA EFLRVAVAHN VRVAANQPLS VPFQIPVPWE TPVTAVGGAP LPGVSVGVRT ELVIAGAPDK GDLDPVLISP LPSQDRVLQA FGQLGFQFRK ADVEAGRIHG VNQELGFYQE LEFFPPQQFA GRVNEVELTF VANPHELVVV LEADKRGGVF SSGGDAFGRF HVSHNDAMHT DWASAIGQWL TQVVERGGHG AFGGQPGYGA NPAFGGNPAF GGQPGYGQPG GYGQPGYGQP GAYGQPGYGQ PGYGGQPAYG YDQHHHQERR GPGMGAVVGG VAAGVVGGMI LNEVIDEVGD SFEDEGEDFA GGFDEE
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