| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3746 |
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| Symbol | |
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| ID | 8327936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4402828 |
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| End bp | 4404501 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644944235 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003101475 |
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| Protein GI | 256377815 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGACT ACGACGTCCT GGTGATCGGC TCCGGGTTCG GCGGCGCGGT CAGCGCGCTG
CGCCTGACCG AGAAGGGGTA CCGCGTCGGC GTCCTGGAGG CGGGCCGCCG GTTCGCCGAC
CACGAGTTCG CCCGCACCTC CTGGCGGCTG CGCGACTACC TGTTCGCCCC GGCCGTCGGC
TGCTACGGCA TCCAGCGGAT CGACCTGCTG CGCGACGTGC TCGTGCTCAG CGGCGCGGGC
GTCGGCGGCG GCTCGCTGGT CTACGCCAAC ACCCTCTACC GGCCCGGCGA GCACTTCTTC
ACCGCGCCCG CGTGGAGCGG CACCGCCGAC TGGAAGGCCG AGCTGGGCCG CTGGTACGAC
CAGGCGGAGC GGATGCTCGG GGTCGTGGAG AACCCGCTGA CCACCCCGGC GGACCGGGTG
CTGCGCGCGG TCGCCGACGA CCTCGGCGTC GGCTCCACCT ACCACCGCTC CCGCGTCGGC
GTGTTCTTCG CCGAGCGCCC CGGCCAGCGG GTGGCCGACC CGTTCTTCGG CGGCGTCGGG
CCCGAGCGCG CCGGGTGCAC GCACTGCGGC GAGTGCATGA CCGGGTGCAG GCACAACGCC
AAGAACACGG TGACCAAGAA CTACCTGCAC CTGGCCGAGC GCGCGGGCGC GACCGTGCAC
CCGCTGACCA CGGTCACCGA CGTGCGCCCG GTCGCGGGCG GCTACGAGGT GCGCGCCCAC
CGCACCGGCA GGCCGTGGCG CACCGAGGTG CTCACCGCGG GCCAGGTCGT GTTCTCCGCC
GCCGCCATGG GCACCCAGCG GCTGCTGCAC TCGCTGCGCG ACCGGGGCGT GCTGCCGGGT
ATCTCCGCGC GCCTGGGCGT GCTCTCCCGC ACCAACGCCG AGGCCGTGCT CGCGGTCAAG
GCCCGCACCG ACGACGTCGA CTACTCGCGC GGCGTCGCGA TCACCTCCTC GGTGCACCCG
GACCCGCGGA CCCACGTGGA ACCGGTCCGC TACGGGCGCG GCAGCAACGT CATGGGCCTG
CTCATGACCG TGCTCGCCGA CCCCGAGCCC GGCAGGGCGC GCTGGCGCAG CGGCCTGGAC
CGGCTCGTCG AGCAGCGCCG CGACCTGCCC CGCCTGCTGA ACCCCAGGCG CTGGTCGGAG
CGGTCCGTCG CGCTGCTGTT CATGCAGAAC ACCGACACCT CCCTCACCAC CAGGGGCAGG
CGCGGCCCGT TCGGCCGGGG GCTGACCTCG GGGCCGGGGG AGGGGGAGCG CAACGAGGTG
TGGAACCCGG TCGGGCACGA GCTCACCCGG CGGGTGGCCG AGAAGATCGG CGGCATCCCC
GGCGGGGCCT GGACGGACTT CTTCGACGTG CCCCTGACCG GCCACTTCAT CGGCGGCTGC
GGCATCGGCG CGTCCGCCGA GAGCGGCGTG GTCGACGCCT ACCACCGGGT GTTCGGGCAC
GAGGGCCTGC ACGTGGTCGA CGGCTCGACC ATCCCGGCGA ACCTGGGCGT GAACCCGTCG
CTGACCATCA CGGCCATGGC CGAGCGGGCG ATGTCGCTGT GGCCGAACAA GGGCGAGCCC
GACCCGCGCC CGCCGCTGGG GGAGGTGTAC CGGGCGGTGC GACCGATCGC GCCCCGCCAC
CCGGTGGTGC CGCCCACCGC GCCCGCCGCG CTGCTGCCGA TCACCCCGGT GTGA
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| Protein sequence | MPDYDVLVIG SGFGGAVSAL RLTEKGYRVG VLEAGRRFAD HEFARTSWRL RDYLFAPAVG
CYGIQRIDLL RDVLVLSGAG VGGGSLVYAN TLYRPGEHFF TAPAWSGTAD WKAELGRWYD
QAERMLGVVE NPLTTPADRV LRAVADDLGV GSTYHRSRVG VFFAERPGQR VADPFFGGVG
PERAGCTHCG ECMTGCRHNA KNTVTKNYLH LAERAGATVH PLTTVTDVRP VAGGYEVRAH
RTGRPWRTEV LTAGQVVFSA AAMGTQRLLH SLRDRGVLPG ISARLGVLSR TNAEAVLAVK
ARTDDVDYSR GVAITSSVHP DPRTHVEPVR YGRGSNVMGL LMTVLADPEP GRARWRSGLD
RLVEQRRDLP RLLNPRRWSE RSVALLFMQN TDTSLTTRGR RGPFGRGLTS GPGEGERNEV
WNPVGHELTR RVAEKIGGIP GGAWTDFFDV PLTGHFIGGC GIGASAESGV VDAYHRVFGH
EGLHVVDGST IPANLGVNPS LTITAMAERA MSLWPNKGEP DPRPPLGEVY RAVRPIAPRH
PVVPPTAPAA LLPITPV
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