| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3739 |
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| Symbol | |
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| ID | 8327929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4395709 |
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| End bp | 4397280 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644944228 |
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| Product | response regulator receiver modulated serine phosphatase |
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| Protein accession | YP_003101468 |
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| Protein GI | 256377808 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.433453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGC CCCAGCCCAC ACCGGCGCAC ATCCTCGTCG TGGACGACCT GGAGGCCAGC
CGGTACATCA CCGCCAGCTG GCTGCGCCGG GGCGGCCACC AGATCACCGA GGCCGTCACC
GGCGGCGAGG CGCTCGTCCT GCTCGACGAG GTCGAGTTCG ACCTGGTCGT GCTGGACGTC
AACCTGCCCG ACATGAGCGG CTTCGACATC GCCGAGCGCA TCAAGGGCGA CCCGCGCACC
GCCGCCGTGC CGGTCGTGCA CGTCTCCGCC GCGCACCGCG AGGCCGAGGA CCGCATCACC
GGCCTCAACC GGGGCGCGGA CGCCTACCTG ACCGAACCGG TCGACCCCGG CGAGCTGCTG
GCCACCGTCG AGGCGGCCCT GCGCTACTAC CGGGCCCGCG CGCTGGCGGA GCGCCTGGCC
GACCGCCTGG CCAAGCTCAC CAGGGCCACG CTCGCGGTCA ACGCCGCGCA GACCTTCGAC
GGCCTGGCGG AGGCGGCGGC GGCAGGAACC GCGACCGTCC TGGACACCCC GGCCACCGCC
CTGGTGCCCA CCCCGCAGGG CGCGGTCCGC TCCTGCCGCG CCGAGAACGG CGAGGTGGTC
CTGGACACCG CGCCCGACGA CGTCCTGGAG CGGCAGCTCG GCGACGGCGA GGTCCGCCTG
GTCGAGGACC CGGCGTGGCG CCCCGGAGCC CCGGCCGTCG TCGTGGCGGC CCGGCGCAAC
CAGCGCCGCA CCCCGATCCT GCTGGCCGTG GACCCGGCGA GCGCGGCCAC CGACGAGGAC
CGCAACCTCC TGCGCCAGCT GGCCCAGGCC ACCGCGCTGG CCGCCGACGG CCTGCGGGCG
TTCGCCGAGG AGCACAACCT GGCCCTGACC CTGCAGCGCA GCCTGCTGCC CAGGGTCCTG
CCGACCAGGC CCACCCTGCC CATGACGGCC AGGTACGTGC CCGCGTCCGC GCACGCCGAG
ATCGGCGGCG ACTTCTACGA GGTCACCGAG CTCGACGACG ACCGGCTGCT GATCGCCATC
GGCGACGTCT GCGGCCACTC GCTGGACGCG GCCACCATCA TGGGCGAGGT CCGGCACGCC
CTGCGCGCCT ACGCCGTGGA GGAGCGCGAC CCGGCGGCGA TCCTGGCCAA GCTGGACGCG
ATGCTCCAGC GCTACCACCC CTTCCGGGGC ATCACCACGC TCTGCCTGTT CCTGGTGGAC
CCGGCGGACG GCTCGACCCT GGTGGCGAAC GCGGGCCACG TCCCGCCGCT GCTGGCCGAC
GAGTCGGGCG CCCGCTACCT GGACGAGATC CGCGGCCCCC TGCTGGGCGT CGGCCTGCCG
AGGCCGCCCG CGACGCCGCT GGTGCTGCCC GAGGGCGCCT TGGTCCTGCT CACCACCGAC
GGCCTGGTCG AGCACGCCGG CGAGGACATG GACGTCGGCC TCGACCTGCT GCGCGAGTCC
GTGTCGCACG ACGACGACAT GGACGCGCTG TGCGACCGCC TCCTGGCCGA ACTGGGCCAG
CAGAAGAAGG ACGACATCGC CCTGCTGGCC TTCCGCAGGC TCGGCCACCT GAACGGGGGA
GAGGCCGAGT AA
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| Protein sequence | MNLPQPTPAH ILVVDDLEAS RYITASWLRR GGHQITEAVT GGEALVLLDE VEFDLVVLDV
NLPDMSGFDI AERIKGDPRT AAVPVVHVSA AHREAEDRIT GLNRGADAYL TEPVDPGELL
ATVEAALRYY RARALAERLA DRLAKLTRAT LAVNAAQTFD GLAEAAAAGT ATVLDTPATA
LVPTPQGAVR SCRAENGEVV LDTAPDDVLE RQLGDGEVRL VEDPAWRPGA PAVVVAARRN
QRRTPILLAV DPASAATDED RNLLRQLAQA TALAADGLRA FAEEHNLALT LQRSLLPRVL
PTRPTLPMTA RYVPASAHAE IGGDFYEVTE LDDDRLLIAI GDVCGHSLDA ATIMGEVRHA
LRAYAVEERD PAAILAKLDA MLQRYHPFRG ITTLCLFLVD PADGSTLVAN AGHVPPLLAD
ESGARYLDEI RGPLLGVGLP RPPATPLVLP EGALVLLTTD GLVEHAGEDM DVGLDLLRES
VSHDDDMDAL CDRLLAELGQ QKKDDIALLA FRRLGHLNGG EAE
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