Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3708 |
Symbol | |
ID | 8327898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4358375 |
End bp | 4359940 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644944197 |
Product | alpha amylase catalytic region |
Protein accession | YP_003101437 |
Protein GI | 256377777 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTCA CCAGCACCGC CGACCTGTGG TGGAAGAACG CGGTCGTCTA CTGCCTGGAC GTGGAGACCT TCCACGACGG CAACGGCGAC GGCGTCGGCG ACTTCCGCGG CCTGATCCAG AAGATCGACC ACCTGCACCG CCTGGGCGTG ACCTGCCTGT GGCTGATGCC GTTCTACCCG ACCGCGAACC GCGACGACGG CTACGACATC ACCGACTACT ACTCGGTCGA CCCGCGCCTG GGCACCCTCG GCGAGTTCGC CGAGCTCGTG CGCACCGCCC GCGACCGGGG CATCCGGGTC ATCGCCGACC TGGTGGTCAA CCACACCTCC GACCAGCACC CGTGGTTCCA GGCCGCGCGC AGCGACCCGG ACTCGCCCTA CCGCGACTGG TACGTGTGGG CCGACGAGCG CCCGCCGAAC GCCGACGACG GCGTGGTCTT CCCCGACAAG GAGACCTCGC TGTGGGACTA CGACCGCAAG GCCAAGCAGT ACTACCTGCA CCGGTTCTAC CGGCACCAGC CGGACCTGAA CGTGGCCAAC CCGGACGTGC GCGACGAGAT CGCCCGCGTC ATGGGGTTCT GGATGCAGCT GGGCCTGTCC GGCTTCCGGG TCGACGCGGT GCCGTTCCTG CTGGAGGCGC CCATCGAGGC GCTGCCGGAC CCGCACGACT ACCTGCAGGA CCTGCGGGCG TTCCTGTCCC GCCGCGACGG CGAGGCGGTC CTGCTGGGGG AGGTGAACGT GCCCTACAAC GACGCGCTGA GCTACTTCGG CAGCGCGGAG GGCGTCGGGG ACGAGCTGAC GATGTGCTTC GACTTCGTCG GGATGCAGCA GATGTACCTC TCGCTCGCCC GCCGGGACGC CTCGCCGCTC ACGCACGCGC TGCGCGAGCG CCCGGAGCCG CCGCGCGACG CCCACTGGGC CACGGTGGTG CGCAACCACG ACGAGCTGAC CCTGGACAAG CTGACCGAGC CCGAGCGGCA GGAGGTGTTC GCCGCGTTCG GGCCCGACCC GGACATGCAG GTGTACGGGC GGGGGCTGCG TCGCAGGCTG CCCCCGATGC TGGAGGGCGA CGAGCGGCGG GTGCGCATGG TGTACAGCCT GCTGTTCTCG CTGCCGGGCA CGCCGGTGCT GTTCTACGGC GAGGAGATCG GCCTCGGCGA GGACCTGTCC CGCGAGGGGC GGATGGCGGT GCGGGTGCCG ATGGACTGGG AGGCGGTCAG CGAGCAGCGG CGCGACTCCG GGTCGCTGCT GGCGTGGTTC CGGCTGCTGG TGGAGCGGTA CCGGGAGTGC CCGGAGCTGG CGTGGGGCGC GCACCGGGTG GTGGACACCG GTGAGGCGGC GGTGCTGGTG CAGCACAGCG AGGTGGACGG GCACGTGGTG CTGACGGCGC ACAACCTGGC CGACCGCGAG GTGGAGCTCC AGGTGCCGGA CCTGGAGCCG GGGCAGCGGC TGACGGACCT GCTGGTGGAC GGCACGGTGC AGGCCGACGA GGAGGGCGTG GTGCGGTTGA CCCTGGAGCC GTACGGGTGC CGGTGGTTCC GCACGGACGT GGACCGGGTG ACGTGA
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Protein sequence | MRLTSTADLW WKNAVVYCLD VETFHDGNGD GVGDFRGLIQ KIDHLHRLGV TCLWLMPFYP TANRDDGYDI TDYYSVDPRL GTLGEFAELV RTARDRGIRV IADLVVNHTS DQHPWFQAAR SDPDSPYRDW YVWADERPPN ADDGVVFPDK ETSLWDYDRK AKQYYLHRFY RHQPDLNVAN PDVRDEIARV MGFWMQLGLS GFRVDAVPFL LEAPIEALPD PHDYLQDLRA FLSRRDGEAV LLGEVNVPYN DALSYFGSAE GVGDELTMCF DFVGMQQMYL SLARRDASPL THALRERPEP PRDAHWATVV RNHDELTLDK LTEPERQEVF AAFGPDPDMQ VYGRGLRRRL PPMLEGDERR VRMVYSLLFS LPGTPVLFYG EEIGLGEDLS REGRMAVRVP MDWEAVSEQR RDSGSLLAWF RLLVERYREC PELAWGAHRV VDTGEAAVLV QHSEVDGHVV LTAHNLADRE VELQVPDLEP GQRLTDLLVD GTVQADEEGV VRLTLEPYGC RWFRTDVDRV T
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