Gene Amir_3681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3681 
Symbol 
ID8327871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4315537 
End bp4318965 
Gene Length3429 bp 
Protein Length1142 aa 
Translation table11 
GC content75% 
IMG OID644944171 
Productamino acid adenylation domain protein 
Protein accessionYP_003101411 
Protein GI256377751 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACCC TCGAGGGCAC CGCCACGAGC GCACCCGAAA GCACCCCCGA GTTCCTGGCG 
GGCCTGCGCC GCGCGGGCGT CACGGTGACG GCCGAGGGCG ACGACCTCCG GTGCGCCGCG
CCCCCCGCCG TGCTCACCGC CGACCTGCGC GCGGAGATCG TGGCGCGCAA GCCCGAGATC
CTGCGGGAGT TGCGCGCCGC AGCGGTGGCC GTCCCGGTTC TCGACGGCCC ACCGCCGCTG
TCGTTCGCCC AGGAGCGGCT GTGGCTGGTG CACCGGTTCC ACCCCGGCTC CAGCGCCTAC
CACGCCACCC TGCACCTGCG GCTGAGCGGC GCGCTCGTGG TCCCCGCGCT GCGCACGGCT
CTGCGCGAAC TGGTCCGCAG GCACGCCGTC CTGCGCACCC GGTACCCCGT CGTTGGCGGC
GTGCCCGTGG CCGAGGTGCG CCCGGCCGCG ACCTCGCCGC TACCCCTGGT GGACCTCACG
GACCTGCCCG CCCTCGAGGC GACTGCGGCG AGCGGTCGGC TCGCCGCGGT CCTGACCGCC
CGCCCGTTCG ACCTCGAAAC CGGTCCCGTG CTGAGGGCGG TGCTGCTCCG GCGTGGTCGC
GACGACCACG ACCTGGTCCT CGTGCGGCAC CACATCGCCA GCGACGGGTG GTCGCTGGGG
GTGCTGCTGT CCGATCTCGT CGAGCTGTAC CGGGCGCACG CCGCGGGCGT GCACGCCGAC
CTGCCCCCCC TCCCGGTTCA GTACGGCGAC TTCGCCGCCT GGCAGCGGCA GCGGGCCGAG
GTGCCCGACT TCGGCGAGCG GCTCGCCCGG TGGACCACCG CGCTCGAGGG GGCGCCCGCC
CAGCTGGACC TGCTGGGCCG CGCACCGGGC GGTGAGCAGG GCCGCCTCGC GGGCTCGACG
ACCGCACGGA CCGGCGCCGT GCTGACCGGA CAGCTCCGCG AGCTGGCCGC CCGCAGGCGG
ACGACGCTGT TCCCGGTACT GCTCAGCGCG TTCGCGCTGG CGCTGAGCGG CTTGTCCGGC
CAGCGCGACG TGGTCGTCGG CGCTCCCGTC GCGGGGCGCT CCCGGCGCGA GCTCGACCAC
CTGATCGGCT GCTTCGTCAA CCTCCTGCCG CTGCGCGTCG ACACGTCCGG GGCGCTCGAC
TTCACCCACC TGCTCGACCG GGTGGCCGCG GTCGTCCGCC ACGGGTTGGC GGACCAGGAG
GTCCCGTTCG AGCGGATCGT CGACGCGCTG CGCCCCGACC GCTCCTTCGC GGACACCCCG
CTCGTCCAAG CCGTCCTCGC GTTCCAGAAC ACCCCCGCGT CCCGGATCGC GCTGCCGGGG
CTGACCGCCG AGGTGCTGGC CTCCCCGCCG GTGGCGGCGA AGTTCCCCCT CGCCATGACG
GTCACCCCCG ACGATCCTGG CCTGGCGCTG GAGCTGGAGT ACGACCGGGC CAGGATCCAC
CCCGCCACCG CGGCCGACCT GCTGGCGAGG ACGGTGGCCG CGCTGGAGGT GGCGGCGACG
TCGCCGTACC TGCCGCTGCC GCTGGTCGAG CGGACCCCGC CTGCCTGGGA GGACGCGCCC
GGCGACGTCC CGGTCGGGAC CGGTCTGCTC CACCTGGAGT TCGAAAGGGT CGCGGCGGAG
CAGCCGGACG CGGTCGCGAT CACCGACGGC GGCGCCCAGA TCACCTACCG GCGGCTCGAC
GCGCGCGCGA ACGCGCTCGC CGCCAAGCTG GTGGACCATG GCGTTGGCCG GGAAACGCTG
GTCGGGCTGT GCGTCGCCCC CTCGATCGAC CTCGTCGTGG GGATGCTGGG AATCCTCAAA
GCCGGGGCGG CGTACGTCCC GATCGACCCG GCCGACCCGC CGCTGCGGCG CGCCGAGCTC
GCCGCAACGG CGGGGCTGCA GCTGGTGGTG ACCGAGCGGG TGGTGCTCAA CAGCCCCGAC
CCGCGCGTCG AGCTGCTGTT CCTCGACCAG CTCGCGCCCC GCGAGGCGGC CCGTCCGGTC
ACCCGGCGGG CACACGCGGA CAACCTGGCT TACGTGATCT TCACGTCGGG GTCGACCGGT
AGCCCGAAGG GGGTGCTGGT CAGCCACCAC AACATCGTGT CGGTGCTGTC TGGGTGCCGG
GCCGCACTGC CGGAGTCGGC CGGTGCGGAG CACACCTGGG CCGTGCTGCA CTCCCCGGCC
TTCGACTTCT CCGCTTGGGA GATCTGGGGC GCGCTGACCA ACGGCGCGCG CCTGGCGATC
GTCCCGCCGG GGGTCGTCCG CGCCCCGGAC GAGCTGTGGC GGACCGTGGT GACCGAGCAG
GTCAGCGTGC TGAGCCAGAC ACCGGGCGCC TTCCGCGCCC TCGTACCGAC CGCACTGCGC
TCCAAGGCGG GCGGGACGCC CCTGGCCGCG GTCGTACTCG GCGGCGAGTC CTGCGAGGTC
GCGAAGCTCG CGCCCTGGTT CGACGCCTGC GGCGGGCGCC CGCCCGCGCT GGTGAACATG
TTCGGCATCA CCGAGACGAC GATCCACGTC ACCGCGCGCC ACCTCGCCCC GGCCGACGTG
ACCGGCCCGG CCGCGAGCCC GCTGGGCCGC GCGGTCCCCG GCCAGCGGAT CGACGTGGTG
GACGAGGGCG GGACCCCGAG GACCGCGGGC GGGCAGGGCG AGCTCGTCGT GAGCGGGGCG
GGTGTGGCGC GCGGCTACCT CGGCCGCCCA GGGCTGACCG CCGACCGGTT CCGGCCCGCA
CCGCACCGCC CCGGCGCCCG CGGGTACCGC TCGGGGGACC TCGCCAGGGT GCTGCCCGGC
GACCTGGACT ACTTGGGGCG CGGAGATCAG CAGGTCTCGG TTCGGGGCTA CCGGGTGGAG
CCCGGCGAGG TGGAGGCCGC CGTGCTGACC CATCCGGGGG TGCGGGACTG CCTCGTGGTC
CCGCACGGCG TCGGGGACCG GTTGCAGCTG GTCGCCTACC TGGTCGCCGA ATCGGGCGAC
GCGCCTGCTG ACCTGTCCAC CACCGCGGTG CGGGCGTTCC TGGCCACGAC GCTCCCGCGC
CACCTGATCC CGGCACGCGC CCTCGTCGTG GAAGCGCTCC CGCTGACCAG GAACGGGAAG
CGGGACCTGC GGGCGCTGCC GGTCCCGCCG CCCGAGCGCT CATCCGGAAG GCCGCTCGCG
CCGGGGACCG AGCGGACCGT CGGCGACCTC GTCGCCCAGG TGCTCAGCTG GGCCGACGCG
GACGGCATCG GCGCCCACGA CAACTTCTTC GACCTCGGCG GGGACTCCCT GCTGGTCACC
CGGTTCCACT TCCTGCTGGT CACCGCCTTC GACGTCGACC TGACGGTGCG GACGGTCTAC
CAGGCCCCTG ATCTCGCGAC GCTTGCGGCG GCCGTGGACC GGCTCCGCGC CGCGCGTCAC
CACGACCTGA TCAGGGAAGC GCTCGAACTG GCCGAGAACG CGACCACGCC CGAGGAGGAG
TCCGCATGA
 
Protein sequence
MSTLEGTATS APESTPEFLA GLRRAGVTVT AEGDDLRCAA PPAVLTADLR AEIVARKPEI 
LRELRAAAVA VPVLDGPPPL SFAQERLWLV HRFHPGSSAY HATLHLRLSG ALVVPALRTA
LRELVRRHAV LRTRYPVVGG VPVAEVRPAA TSPLPLVDLT DLPALEATAA SGRLAAVLTA
RPFDLETGPV LRAVLLRRGR DDHDLVLVRH HIASDGWSLG VLLSDLVELY RAHAAGVHAD
LPPLPVQYGD FAAWQRQRAE VPDFGERLAR WTTALEGAPA QLDLLGRAPG GEQGRLAGST
TARTGAVLTG QLRELAARRR TTLFPVLLSA FALALSGLSG QRDVVVGAPV AGRSRRELDH
LIGCFVNLLP LRVDTSGALD FTHLLDRVAA VVRHGLADQE VPFERIVDAL RPDRSFADTP
LVQAVLAFQN TPASRIALPG LTAEVLASPP VAAKFPLAMT VTPDDPGLAL ELEYDRARIH
PATAADLLAR TVAALEVAAT SPYLPLPLVE RTPPAWEDAP GDVPVGTGLL HLEFERVAAE
QPDAVAITDG GAQITYRRLD ARANALAAKL VDHGVGRETL VGLCVAPSID LVVGMLGILK
AGAAYVPIDP ADPPLRRAEL AATAGLQLVV TERVVLNSPD PRVELLFLDQ LAPREAARPV
TRRAHADNLA YVIFTSGSTG SPKGVLVSHH NIVSVLSGCR AALPESAGAE HTWAVLHSPA
FDFSAWEIWG ALTNGARLAI VPPGVVRAPD ELWRTVVTEQ VSVLSQTPGA FRALVPTALR
SKAGGTPLAA VVLGGESCEV AKLAPWFDAC GGRPPALVNM FGITETTIHV TARHLAPADV
TGPAASPLGR AVPGQRIDVV DEGGTPRTAG GQGELVVSGA GVARGYLGRP GLTADRFRPA
PHRPGARGYR SGDLARVLPG DLDYLGRGDQ QVSVRGYRVE PGEVEAAVLT HPGVRDCLVV
PHGVGDRLQL VAYLVAESGD APADLSTTAV RAFLATTLPR HLIPARALVV EALPLTRNGK
RDLRALPVPP PERSSGRPLA PGTERTVGDL VAQVLSWADA DGIGAHDNFF DLGGDSLLVT
RFHFLLVTAF DVDLTVRTVY QAPDLATLAA AVDRLRAARH HDLIREALEL AENATTPEEE
SA