Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3669 |
Symbol | |
ID | 8327859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4284512 |
End bp | 4285978 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644944159 |
Product | cytidyltransferase-related domain protein |
Protein accession | YP_003101399 |
Protein GI | 256377739 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02198] rfaE bifunctional protein, domain I [TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.088026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCG ATCTGCTCGG CCTGCTGTCC GGGATCAGGG GGCTGCGGGT GCTGGTCGTC GGCGACGCGA TCGTGGACAG GTACCTCACG GGCACCCCGA TCGGGCTGTC CAGGGAGGCC CCGGTCCCCG TGCTCGACCT GACCGGCGAT CACGACCAGT GCGGCGGCGC GGCGAACGTG GCGGCCAACC TCCGCGCGCT CGGCGCCGAT CCGACCCTGC TCGCGGTGGT CGGCGCCGAT CCCGCCGGGC GGCGGTTGCA CGCGGCCATG GCCGCCGCCG GGGTCGGCGC CGATCACCTG GTGGTCGACG AGAGTCGGTC GACGGTGGTC AAGCGCCGAG TGCTGGCCCG CGAGCAGATG CTGCTGCGGC TGGACGAGGG CAGCAGGGAG CGGATCGCCT CGGCCACGGC CGCCGAGCTG GCTCGGCGGT TGGCCGACCA GCTCCGCCGG TGCGACGTGG TGATCGCCTG CGACTACGGC TACGGCACGT TCACCGGCCC CGTCGTCGCG ACGCTGGCCC ACTCCGCCGG GCGCCCGCTG TTCGTCGTGG ACTCCAGGGC TCCCGGCCGC TTCCGGTCGC TTCGCCCGGA CGTGGTCAAG CCGAACTACG CCGAGGCCGC CGCGCTCCTT GGCGAGCCCT CGCTGGACAC CTCCGGCGAC CGGGTGGGCC AGGTCGTGGA GCACCGAGCC CGCCTGCTGG AGCGCACCGG TGCCGGACTC GTCGCGGTCA CCCTGGACCG GGACGGCGCC GTGGTGCTGC AAGCGGGCAG GCCGAGCCTG CGGACCTGCG CGACCGTTCG CGAAGCCGAG ACGACCGTCG GCGCGGGGGA CACCTTCACC GCCGCGTTCG CGCTGGCGCT GGCCTCGGGA GCCGAACCCG CCTCCTCCGC CGAGTTCGCC TCCGCGGCCG CGGGAACCGT GGTGCGCAAA CCGGGAACGG CGATCTGCGA CCCGGCGGAG CTGCGGCGGA GGCTGGGTGG CACCGGCAAG ATCCTGCCGG GCGACGAGCT GCCCTCGTGG CTGACCGACG TCGCGGGCCG CGGCTGTCAG GTCGTGTTCA CCAACGGCTG CTTCGACATC CTGCACGACG GCCACGTCTC CCTGCTCAGC CGCGCGAAGG GCCTCGGCGA GCTGCTCGTC GTGGGGGTGA ACGCCGACGA GAGCGTCCGC AGGCTCAAGG GCCCGTCCCG GCCGGTGGTC CCACTGGGCG AGCGGATGCG GGTCCTGGCC GCGCTGGGGT GCGTCGACGT CGTGGTCCCG TTCCACGCCG ACAGCCCCGT GGAGCTGATC GAGCGGCTGC GACCGGACGT CTACGCCAAG GGCGACGACT ACACCCTCCA GGACCTGCCG GAGGCCTCGC TCGTCGAGCG GCTCGGCGGT CGCGTCGAGC TGCTGCGCAC GGTCGACGGC CGATCCACCA CCAAGATCAT TCGAGACATC CACGCGCTGT CGGGCGAGAG GCGATGA
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Protein sequence | MSGDLLGLLS GIRGLRVLVV GDAIVDRYLT GTPIGLSREA PVPVLDLTGD HDQCGGAANV AANLRALGAD PTLLAVVGAD PAGRRLHAAM AAAGVGADHL VVDESRSTVV KRRVLAREQM LLRLDEGSRE RIASATAAEL ARRLADQLRR CDVVIACDYG YGTFTGPVVA TLAHSAGRPL FVVDSRAPGR FRSLRPDVVK PNYAEAAALL GEPSLDTSGD RVGQVVEHRA RLLERTGAGL VAVTLDRDGA VVLQAGRPSL RTCATVREAE TTVGAGDTFT AAFALALASG AEPASSAEFA SAAAGTVVRK PGTAICDPAE LRRRLGGTGK ILPGDELPSW LTDVAGRGCQ VVFTNGCFDI LHDGHVSLLS RAKGLGELLV VGVNADESVR RLKGPSRPVV PLGERMRVLA ALGCVDVVVP FHADSPVELI ERLRPDVYAK GDDYTLQDLP EASLVERLGG RVELLRTVDG RSTTKIIRDI HALSGERR
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