Gene Amir_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3623 
Symbol 
ID8327813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4240640 
End bp4242430 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content74% 
IMG OID644944118 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003101358 
Protein GI256377698 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAGG TCACCACCGC GCCCCTTCCC GCCGTGCCCG TCGACGGCGG TCTCGCCCAG 
CTCGTGCAGG TCAACGCCGA GCGGGCGCCC GACTCCACCG CGTTCCGCCG CAAGAGCGCC
TCGGGGTGGA CCCCCGTCAC CGCGCGCGAG TTCCGCGACC AGGTCGTCTC GGTCGCGAAG
GGCCTTGTCA GCTCAGGGGT CCAGCCCGGC GACCGGGTGG TGATCCTGGC GTCGACCCGC
TACGAGTGGA CCCTGCTCGA CTTCGCGGTG TGGGCCGCGC GCGCCGTGTC GGTGCCGGTC
TACCCGACCT CGTCGGCCGA GCAGGTCGCC TGGATCGTCG CCGACTCCGG GGCGAGCGCG
GCGGTCGTGG AGACCGACGA GCACGAGCGG CACGTGCGGG ACGCGTTCGC CGAGGCCGGG
AGGCAGGCCC CGGTGTGGCG GATCGACGAC GCCCCCGCGG AGCTGTCGGT CGCGGGCGCG
GACGTCCCCG ACGCCGAGGT GCTGGACCGC TGCCGGGAGA CCGGGCACGA CGAGCCCGCC
ACGATCGTCT ACACCTCGGG CACCACCGGC AGGCCCAAGG GGTGCGTGCT CACGCACGGG
AACTTCCTGG CCGAGGCCAG GGGCGCGGTC GGTGTGCTGG GCTCGCTGTT CGGCGACGGC
GGCGCGGCGC AGGCGTCCAC CCTGCTGTTC CTGCCGCTGG CGCACGTCGT CGGCCGGATG
CTCCAGGTGG GCGCGGTGTG GGCCGGGGTC ACCCTGGGGC ACACCGCGAA GGTCGGCGAC
GCGGTGGCGG ACCTGGCCAC GTTCCGGCCG ACGTTCGTGC TCGCGGTGCC GTACGTGCTG
GAGAAGATCT TCCACGGGGC GCGGCAGAAG GCGCTGGACT CGGGCAGGGG CAAGGTGTTC
GACGCGGCGA CCGAGGTCGC GGTGGCGCAC TCGTCGGCGG ACTCCCCCGG TCTCGGGCTG
CGGCTGCGGC ACGCCGCCTT CGACCGGCTG GTGTACCGCA GGCTGCGGGC CGCGCTGGGC
GGGCGGTGCG AGCACGTGCT CTCCGGCGGC GCGGCCCTGT CGCCCCGACT GGTGCACTTC
TACCGGGCCG CCGGGATCAC CGTGCTGGAG GGCTACGGCC TGACCGAGAC CACGTCGACG
GCCACGATCA ACACCCCCGA GGCGTTCCGC GCGGGCACGG CGGGCAGGCC GCTGCCCGGC
ATGTCGCTGC GGATCTCGGA CGCGGGCGAG GTGCTCGTCA AGGGGCCCAC GGTGTTCGGC
GGCTACTGGC GGGACGAGGA GTCCACGGCG GCGACCTTCG ACGACGGCTG GCTCACCACC
GGCGACCTCG GGCACGTGGA CGAGGCGGGC TTCCTGGTGA TCACCGGGCG CAGCAAGGAG
ATCCTGGTGA CCAGCGGCGG GAAGAACGTC TCCCCCGCCG CCATCGAGGA CCGCATCGGC
GGGCACCCGC TGGTGGGCAA CGCCGTGGTG GTGGGCGACG GGCGCAACTA CGTCGCGGCG
CTGCTGACCG TGGACCAGCA GCACTTCCCG GTGTGGAAGC GCTCGGCGGG CAAGTCCGCG
GAGGCGACCG TCGAGGAGCT GTCCGGTGAC CCGGACCTGC TGGCGGAGCT CCAGCGCGCG
GTGGACCTCG GGAACGCGGC GGTGTCACGC GCGGAGTCGG TGCGCAGGTT CCGGGTGCTG
CCGGTGGAGT TCACCCAGGA GAACGGGTGT TTGACGCCGT CGCTGAAGGT GAAGCGCGAC
GTGGTGGTGC GACGCTGGGC CGACGAGGTG GAGGCCTGCT ACGCCGGGTG A
 
Protein sequence
MREVTTAPLP AVPVDGGLAQ LVQVNAERAP DSTAFRRKSA SGWTPVTARE FRDQVVSVAK 
GLVSSGVQPG DRVVILASTR YEWTLLDFAV WAARAVSVPV YPTSSAEQVA WIVADSGASA
AVVETDEHER HVRDAFAEAG RQAPVWRIDD APAELSVAGA DVPDAEVLDR CRETGHDEPA
TIVYTSGTTG RPKGCVLTHG NFLAEARGAV GVLGSLFGDG GAAQASTLLF LPLAHVVGRM
LQVGAVWAGV TLGHTAKVGD AVADLATFRP TFVLAVPYVL EKIFHGARQK ALDSGRGKVF
DAATEVAVAH SSADSPGLGL RLRHAAFDRL VYRRLRAALG GRCEHVLSGG AALSPRLVHF
YRAAGITVLE GYGLTETTST ATINTPEAFR AGTAGRPLPG MSLRISDAGE VLVKGPTVFG
GYWRDEESTA ATFDDGWLTT GDLGHVDEAG FLVITGRSKE ILVTSGGKNV SPAAIEDRIG
GHPLVGNAVV VGDGRNYVAA LLTVDQQHFP VWKRSAGKSA EATVEELSGD PDLLAELQRA
VDLGNAAVSR AESVRRFRVL PVEFTQENGC LTPSLKVKRD VVVRRWADEV EACYAG