Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3623 |
Symbol | |
ID | 8327813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4240640 |
End bp | 4242430 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644944118 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003101358 |
Protein GI | 256377698 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGAGG TCACCACCGC GCCCCTTCCC GCCGTGCCCG TCGACGGCGG TCTCGCCCAG CTCGTGCAGG TCAACGCCGA GCGGGCGCCC GACTCCACCG CGTTCCGCCG CAAGAGCGCC TCGGGGTGGA CCCCCGTCAC CGCGCGCGAG TTCCGCGACC AGGTCGTCTC GGTCGCGAAG GGCCTTGTCA GCTCAGGGGT CCAGCCCGGC GACCGGGTGG TGATCCTGGC GTCGACCCGC TACGAGTGGA CCCTGCTCGA CTTCGCGGTG TGGGCCGCGC GCGCCGTGTC GGTGCCGGTC TACCCGACCT CGTCGGCCGA GCAGGTCGCC TGGATCGTCG CCGACTCCGG GGCGAGCGCG GCGGTCGTGG AGACCGACGA GCACGAGCGG CACGTGCGGG ACGCGTTCGC CGAGGCCGGG AGGCAGGCCC CGGTGTGGCG GATCGACGAC GCCCCCGCGG AGCTGTCGGT CGCGGGCGCG GACGTCCCCG ACGCCGAGGT GCTGGACCGC TGCCGGGAGA CCGGGCACGA CGAGCCCGCC ACGATCGTCT ACACCTCGGG CACCACCGGC AGGCCCAAGG GGTGCGTGCT CACGCACGGG AACTTCCTGG CCGAGGCCAG GGGCGCGGTC GGTGTGCTGG GCTCGCTGTT CGGCGACGGC GGCGCGGCGC AGGCGTCCAC CCTGCTGTTC CTGCCGCTGG CGCACGTCGT CGGCCGGATG CTCCAGGTGG GCGCGGTGTG GGCCGGGGTC ACCCTGGGGC ACACCGCGAA GGTCGGCGAC GCGGTGGCGG ACCTGGCCAC GTTCCGGCCG ACGTTCGTGC TCGCGGTGCC GTACGTGCTG GAGAAGATCT TCCACGGGGC GCGGCAGAAG GCGCTGGACT CGGGCAGGGG CAAGGTGTTC GACGCGGCGA CCGAGGTCGC GGTGGCGCAC TCGTCGGCGG ACTCCCCCGG TCTCGGGCTG CGGCTGCGGC ACGCCGCCTT CGACCGGCTG GTGTACCGCA GGCTGCGGGC CGCGCTGGGC GGGCGGTGCG AGCACGTGCT CTCCGGCGGC GCGGCCCTGT CGCCCCGACT GGTGCACTTC TACCGGGCCG CCGGGATCAC CGTGCTGGAG GGCTACGGCC TGACCGAGAC CACGTCGACG GCCACGATCA ACACCCCCGA GGCGTTCCGC GCGGGCACGG CGGGCAGGCC GCTGCCCGGC ATGTCGCTGC GGATCTCGGA CGCGGGCGAG GTGCTCGTCA AGGGGCCCAC GGTGTTCGGC GGCTACTGGC GGGACGAGGA GTCCACGGCG GCGACCTTCG ACGACGGCTG GCTCACCACC GGCGACCTCG GGCACGTGGA CGAGGCGGGC TTCCTGGTGA TCACCGGGCG CAGCAAGGAG ATCCTGGTGA CCAGCGGCGG GAAGAACGTC TCCCCCGCCG CCATCGAGGA CCGCATCGGC GGGCACCCGC TGGTGGGCAA CGCCGTGGTG GTGGGCGACG GGCGCAACTA CGTCGCGGCG CTGCTGACCG TGGACCAGCA GCACTTCCCG GTGTGGAAGC GCTCGGCGGG CAAGTCCGCG GAGGCGACCG TCGAGGAGCT GTCCGGTGAC CCGGACCTGC TGGCGGAGCT CCAGCGCGCG GTGGACCTCG GGAACGCGGC GGTGTCACGC GCGGAGTCGG TGCGCAGGTT CCGGGTGCTG CCGGTGGAGT TCACCCAGGA GAACGGGTGT TTGACGCCGT CGCTGAAGGT GAAGCGCGAC GTGGTGGTGC GACGCTGGGC CGACGAGGTG GAGGCCTGCT ACGCCGGGTG A
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Protein sequence | MREVTTAPLP AVPVDGGLAQ LVQVNAERAP DSTAFRRKSA SGWTPVTARE FRDQVVSVAK GLVSSGVQPG DRVVILASTR YEWTLLDFAV WAARAVSVPV YPTSSAEQVA WIVADSGASA AVVETDEHER HVRDAFAEAG RQAPVWRIDD APAELSVAGA DVPDAEVLDR CRETGHDEPA TIVYTSGTTG RPKGCVLTHG NFLAEARGAV GVLGSLFGDG GAAQASTLLF LPLAHVVGRM LQVGAVWAGV TLGHTAKVGD AVADLATFRP TFVLAVPYVL EKIFHGARQK ALDSGRGKVF DAATEVAVAH SSADSPGLGL RLRHAAFDRL VYRRLRAALG GRCEHVLSGG AALSPRLVHF YRAAGITVLE GYGLTETTST ATINTPEAFR AGTAGRPLPG MSLRISDAGE VLVKGPTVFG GYWRDEESTA ATFDDGWLTT GDLGHVDEAG FLVITGRSKE ILVTSGGKNV SPAAIEDRIG GHPLVGNAVV VGDGRNYVAA LLTVDQQHFP VWKRSAGKSA EATVEELSGD PDLLAELQRA VDLGNAAVSR AESVRRFRVL PVEFTQENGC LTPSLKVKRD VVVRRWADEV EACYAG
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