Gene Amir_3612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3612 
Symbol 
ID8327802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4227852 
End bp4228547 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content74% 
IMG OID644944107 
ProductABC transporter related 
Protein accessionYP_003101347 
Protein GI256377687 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACCG GCCCAGTGCT GCGCGCCGAG GGCGTGAGCA AGGAGTTCGG GCGCGGCGAG 
ACCGCGACCA GGGTCCTGCA CGACTGCGAC CTGGAGGTCC GCGCCGGGCA GACCGTGGCC 
ATCGTCGGCA AGAGCGGCAG CGGCAAGTCC ACGTTCGCCA ACTGCCTGTC CGGGCTGGAC 
GAGCCGACCA CCGGCACGAT CACCCTGCTC GGCCACGACC TGGCCGCCCT GGACGAGCCC 
GCGATGGCCA GGCTGCGCGC CGAGCACATC GGCTTCGTGC TGCAGAAGGA CAACCTGGTG 
CCGACGCTCA CCCTGGAGGA GAACGTCGCC GCCCCGCTGA TCATGTCCGG AACCCGGCTG 
TCCGCCGCGC TCGCCAAGGC CCGCTCCGCG CTGGACGAGG TCGGCCTGGC GCACCGCGCG 
GGCAGCTGGC CCGGCCAGGT CTCCGGCGGC GAGGCCCAGC GCGCCGCCGT GGCCAGGGCG 
TGCGTCAACG ACCCGGCCAT CGTGTTCGCC GACGAGCCGA CCGGCGCGCT CGACGAGGAG 
AACGGCCTGC GCGTGCAGGA GCTGTTCCGG GCCGTGGTGC GCGAGCGCGG CGCCGCCAGC 
GTCATCATCA CCCACGACCT GGACCTCGCC GCGTGGGCCG ACGTCGTCGC CACCATGACC 
GCGGGCACCG TCGTGTCGCG GGCGCGGGTC TCCTGA
 
Protein sequence
MTTGPVLRAE GVSKEFGRGE TATRVLHDCD LEVRAGQTVA IVGKSGSGKS TFANCLSGLD 
EPTTGTITLL GHDLAALDEP AMARLRAEHI GFVLQKDNLV PTLTLEENVA APLIMSGTRL 
SAALAKARSA LDEVGLAHRA GSWPGQVSGG EAQRAAVARA CVNDPAIVFA DEPTGALDEE 
NGLRVQELFR AVVRERGAAS VIITHDLDLA AWADVVATMT AGTVVSRARV S