Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3551 |
Symbol | |
ID | 8327741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4124841 |
End bp | 4126031 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644944048 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_003101288 |
Protein GI | 256377628 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00861424 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCCCTG CCAGAACCTC CTTGGCCGTC CTCGCCGCCA CCGCCACCGC CGTCGTCGTC GCGGCCACCG CCACCACCGG TGCGGCCACG GCAGCCCCCC GGTTGGCCGC CCTGGTCTCA CCGAAGACCG GCGGCGCCGT CCAGCCCGTC AAGGACTCCT ACGTCGTCCT GCTCAAGGAC GGCGCCGCCG AGGCCCGCAC CCTGTCGGCG GCCGAGGGCA TCACGCCGAA GCACGTGTGG AACGAGGCGG TCAAGGGCTT CTCCGCCACG CTGAGCCCCG ACCAGCTCGC CGAGGTGCGC CGCAACCCGG CCGTCGCCCT GGTCGAGCAG GACGTCATGG TCACCGACCT GCTCGACGCC ACCCAGGCCA ACCCGCCCTC GTACGGCATC GACCGGATCG ACCAGGTCAG CCTGCCGCTC TCCAACAGCT ACACCTACAA CTCCACCGGC GCCGGCGTGC ACGCCTACGT CATCGACACC GGCATCACCA CCACGCACGC CGACTTCGGC GGCCGGGCCA CCTTCGACTA CAACGCCATC GACACCAACA ACACCGACTG CTACGGCCAC GGCACGCACG TGGCGGGCAC CGTCGGCTCG GCCACCTACG GCGTCGCCAA GGGGGTGCGG CTGCACGCGG TGAAGATGAT GAACTGCTCC GGCGGCGCCA CCACCACGGC GGCGGTCAAC GCCATCAACT GGGTCACCGC GAACGCCCAG CGCCCGGCGG TGGCCAACAC CTCCTGGAAC TTCACCGCCT CCGCCGCGCT GGAGACCGCG ATCCGCAGCA TGATCTCCTC CGGGGTGTTC CTGGCGACGT CGGCGGGCAA CACCGCCGCC AACTCGTGCG ACCGCCTGCC CCGCAAGGTC GAGACGGCCA CGGTCGTCGC GTCCTCGGAC AGCGCGGACG CCCGCTCCAC CTTCTCCAGC ACGGGCGCGT GCGTGGACCT GTACGCGCCG GGCACCTCGA TCCGCTCCAC GCTGAACACC GGCGGCAACG GCCTGATGAG CGGCACCTCC ATGGCGACCC CGCACGTGGC GGGCGTGGCG GCGCTGTACA AGGCGACCTA CGGCGACGCG CCGTCGGCGA CGGTGCACGA CTGGCTGAAC AGCAAGGCCA CCCCGAACAA GATCACCGGC GGGGCGACCG GCGGCACGGC CAACCGGCTG CTGAACACCG CCGGGCTCTG A
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Protein sequence | MRPARTSLAV LAATATAVVV AATATTGAAT AAPRLAALVS PKTGGAVQPV KDSYVVLLKD GAAEARTLSA AEGITPKHVW NEAVKGFSAT LSPDQLAEVR RNPAVALVEQ DVMVTDLLDA TQANPPSYGI DRIDQVSLPL SNSYTYNSTG AGVHAYVIDT GITTTHADFG GRATFDYNAI DTNNTDCYGH GTHVAGTVGS ATYGVAKGVR LHAVKMMNCS GGATTTAAVN AINWVTANAQ RPAVANTSWN FTASAALETA IRSMISSGVF LATSAGNTAA NSCDRLPRKV ETATVVASSD SADARSTFSS TGACVDLYAP GTSIRSTLNT GGNGLMSGTS MATPHVAGVA ALYKATYGDA PSATVHDWLN SKATPNKITG GATGGTANRL LNTAGL
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